RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 FBXO48Q5FWF7 155 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 SYTL1Q8IYJ3 562 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 ARMC2Q8NEN0 867 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 OR10G6Q8NH81 332 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 SELENOSQ9BQE4 189 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 RAB11FIP5Q9BXF6 653 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 COL5A1P20908 1838 aaPredicted RBP26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 TMEM120BA0PK00 339 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 PNLIPRP1P54315 467 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 TSTA3Q13630 321 aaPredicted RBP26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 FASTKQ14296 549 aaKnown RBP26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 C18orf21Q32NC0 220 aaPredicted RBP26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 PIP4P1Q86T03 277 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 LINC01555Q8NAE3 123 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 PDPRQ8NCN5 879 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 NETO1Q8TDF5 533 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 FBXL8Q96CD0 374 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 ATG10Q9H0Y0 220 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 ANKRD12Q6UB98 2062 aa26.41■■□□□ 1.82
CHMP4B-201ENST00000217402 OR6C74A6NCV1 312 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 TARM1B6A8C7 271 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 PRPF4O43172 522 aaKnown RBP eCLIP26.4■■□□□ 1.828e-7■■■■■ 29.4
CHMP4B-201ENST00000217402 SMIM24O75264 130 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 UBXN7O94888 489 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 MPP2Q14168 576 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 PFKFB4Q16877 469 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 ANKS6Q68DC2 871 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 AGTRAPQ6RW13 159 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 SPRED1Q7Z699 444 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 FBXO39Q8N4B4 442 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 ANKRD42Q8N9B4 389 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 RSC1A1Q92681 617 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 RHBDF1Q96CC6 855 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 CCDC3Q9BQI4 270 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 ABCF3Q9NUQ8 709 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 WWOXQ9NZC7 414 aa26.4■■□□□ 1.82
CHMP4B-201ENST00000217402 CASC3O15234 703 aaKnown RBP26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 GPR3P46089 330 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 NR1D2Q14995 579 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 AMZ1Q400G9 498 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 NKAIN2Q5VXU1 208 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 DEFB124Q8NES8 71 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 OR2L8Q8NGY9 312 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 ATL1Q8WXF7 558 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 MED8Q96G25 268 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 CDC6Q99741 560 aa26.39■■□□□ 1.82
CHMP4B-201ENST00000217402 BTN3A3O00478 584 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 ERGP11308 486 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 PNLIPP16233 465 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 AMD1P17707 334 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 TAC1P20366 129 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 EPHA4P54764 986 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 GPS2Q13227 327 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 ARHGAP19Q14CB8 494 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 CYP2A13Q16696 494 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 ZXDCQ2QGD7 858 aaPredicted RBP26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 SULT1C3Q6IMI6 304 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 PTGR2Q8N8N7 351 aaPredicted RBP26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 ESAMQ96AP7 390 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 PYCR2Q96C36 320 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 PHF21BQ96EK2 531 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 AHCYL2Q96HN2 611 aaKnown RBP26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 ZMYND15Q9H091 742 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 SYNDIG1Q9H7V2 258 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 MED4Q9NPJ6 270 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 OR6C2Q9NZP2 312 aa26.39■■□□□ 1.81
CHMP4B-201ENST00000217402 IGHV1OR21-1A0A087WYE8 117 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 B4GAT1O43505 415 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 PROS1P07225 676 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 MYL2P10916 166 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 POLR2CP19387 275 aaPredicted RBP26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 ACP1P24666 158 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 HSD17B2P37059 387 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 HNMTP50135 292 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 NAE1Q13564 534 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 CCDC157Q569K6 752 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 SUSD1Q6UWL2 747 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 ADGRF3Q8IZF5 1079 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 TMEM79Q9BSE2 394 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 MLXIPLQ9NP71 852 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 OGFRQ9NZT2 677 aa26.38■■□□□ 1.81
CHMP4B-201ENST00000217402 FAM221BA6H8Z2 402 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 ZNF839A8K0R7 811 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 A8MT66 165 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 E7ENX8 843 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 G3V2L1 256 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 H3BQF6 201 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 TM9SF1O15321 606 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 TAPBPO15533 448 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 TNFSF14O43557 240 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 DLX3O60479 287 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 ZWINTO95229 277 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 CHRM5P08912 532 aaPredicted RBP26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 AGTR2P50052 363 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 TBPL1P62380 186 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 TAP2Q03519 686 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 CDKL4Q5MAI5 379 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 ZYG11AQ6WRX3 759 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 OOSP2Q86WS3 158 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 TCAIMQ8N3R3 496 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms