RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 JAZF1Q86VZ6 243 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 SMYD1Q8NB12 490 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 WDR36Q8NI36 951 aaKnown RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 PMM1Q92871 262 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 FAM149AA5PLN7 773 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 HCAR3P49019 387 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 PRKD1Q15139 912 aaPredicted RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 PARM1Q6UWI2 310 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 KRT77Q7Z794 578 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 IZUMO1Q8IYV9 350 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 NEK6Q9HC98 313 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 LRRC4CQ9HCJ2 640 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 NECTIN3Q9NQS3 549 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 ACSL5Q9ULC5 683 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 PCDHGA11Q9Y5H2 935 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 SLC7A4O43246 635 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 SOX6P35712 828 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 MFSD6LQ8IWD5 586 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 GSTCDQ8NEC7 633 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 OR2T34Q8NGX1 318 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 DLG3Q92796 817 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 SLC25A36Q96CQ1 311 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 DCLRE1BQ9H816 532 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 TRAF6Q9Y4K3 522 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 IL6P05231 212 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 ASMTP46597 345 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 ARHGAP8P85298 464 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 RING1Q06587 406 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 RPS27LQ71UM5 84 aaKnown RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 EZH1Q92800 747 aaPredicted RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 MAP3K3Q99759 626 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 EPB41L4BQ9H329 900 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 GAREM1Q9H706 876 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 STMN3Q9NZ72 180 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 EFR3BQ9Y2G0 817 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 IPO13O94829 963 aaKnown RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 RNF144AP50876 292 aaPredicted RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 SPIBQ01892 262 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 EIF3MQ7L2H7 374 aaKnown RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 PHF10Q8WUB8 498 aaKnown RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 ART4Q93070 314 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 ART5Q96L15 291 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 LEF1Q9UJU2 399 aaPredicted RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 LINC01565O15544 149 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 OR4F21O95013 312 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 FAM58BPP0C7Q3 252 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 COX4I1P13073 169 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 SLC34A1Q06495 639 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 RSBN1Q5VWQ0 802 aaPredicted RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 OR52J3Q8NH60 311 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 MOSPD2Q8NHP6 518 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 NPY6RQ99463 290 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 PCDHGA12O60330 932 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 SHOX2O60902 331 aaPredicted RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 SRP54P61011 504 aaKnown RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 RALGPS1Q5JS13 557 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 EGFLAMQ63HQ2 1017 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 TTLL10Q6ZVT0 673 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 FAM110BQ8TC76 370 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 RGMAQ96B86 450 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 RNFT2Q96EX2 444 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CDK15Q96Q40 435 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 H3BSH0 61 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CD38P28907 300 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 MANEAQ5SRI9 462 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 SMYD5Q6GMV2 418 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 DCUN1D3Q8IWE4 304 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 MPP5Q8N3R9 675 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 RIT1Q92963 219 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 DEFB126Q9BYW3 111 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 ZBP1Q9H171 429 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 ARL8BQ9NVJ2 186 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CNOT3O75175 753 aaKnown RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 IRF9Q00978 393 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 FOXC1Q12948 553 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 SNTA1Q13424 505 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CDX2Q99626 313 aaPredicted RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 MRPL39Q9NYK5 338 aaKnown RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 STYXL1Q9Y6J8 313 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 MYOCOSA0A1B0GUC4 107 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 POLR1CO15160 346 aaPredicted RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 NCK1P16333 377 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CLCQ05315 142 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 PDSS1Q5T2R2 415 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 FIBINQ8TAL6 211 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 ADAMTS19Q8TE59 1207 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CPT1BQ92523 772 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 OLFM1Q99784 485 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 SPRTNQ9H040 489 aaPredicted RBP13.43□□□□□ -0.26
SIX4-201ENST00000216513 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 CTPS2Q9NRF8 586 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 RAB21Q9UL25 225 aa13.43□□□□□ -0.26
SIX4-201ENST00000216513 TK2O00142 265 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 PDPK1O15530 556 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms