RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 SLC25A25Q6KCM7 469 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 OR14C36Q8NHC7 312 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 BRSK1Q8TDC3 778 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 NDRG1Q92597 394 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 ITPAQ9BY32 194 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 MCCC2Q9HCC0 563 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 SMAD9O15198 467 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 HMGN1P05114 100 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 NDUFV1P49821 464 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 GDI2P50395 445 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 NCBP2P52298 156 aaKnown RBP eCLIP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TUBA1BP68363 451 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 GNA12Q03113 381 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TUBA3CQ13748 450 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TUBA1AQ71U36 451 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 SNIP1Q8TAD8 396 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 DCSTAMPQ9H295 470 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 RRAGCQ9HB90 399 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 ABCD2Q9UBJ2 740 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 PCDHGA11Q9Y5H2 935 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 LOC100509620A0A075B734 347 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 INSIG1O15503 277 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 SLC7A1P30825 629 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 MON1BQ7L1V2 547 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 RBM23Q86U06 439 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 PROKR2Q8NFJ6 384 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 SPATA22Q8NHS9 363 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 RELTQ969Z4 430 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 CAMK1GQ96NX5 476 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 PURBQ96QR8 312 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TGFB1I1O43294 461 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 YBEYP58557 167 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 VMACQ2NL98 169 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 LNX2Q8N448 690 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 IRGQQ8WZA9 623 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 FUZQ9BT04 418 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TMEM109Q9BVC6 243 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 SMURF1Q9HCE7 757 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 GRIN2DO15399 1336 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 MATN3O15232 486 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 UGCGQ16739 394 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 CLEC12AQ5QGZ9 265 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 APOBEC3HQ6NTF7 200 aaKnown RBP16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TDRPQ86YL5 185 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 OXR1Q8N573 874 aa16.85■□□□□ 0.29
ITGB4-201ENST00000200181 TCRBV7S2A1N4TA0A589 114 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 EPHX1P07099 455 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 HSD11B1P28845 292 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 HFE2Q6ZVN8 426 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 TMEM110Q86TL2 294 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 SYNPOQ8N3V7 929 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 TMEM145Q8NBT3 493 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 HDAC2Q92769 488 aaKnown RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 GDAP2Q9NXN4 497 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 FZD1Q9UP38 647 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 C14orf166Q9Y224 244 aaKnown RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 SPATA31C2B4DYI2 1134 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 CD40LGP29965 261 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 MCCD1P59942 119 aaPredicted RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 RPP38P78345 283 aaKnown RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 VGLL4Q14135 290 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 DPY19L1Q2PZI1 675 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 VSTM1Q6UX27 236 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ATAD1Q8NBU5 361 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 LRRC3Q9BY71 257 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 CCSER2Q9H7U1 834 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 WDR37Q9Y2I8 494 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 C13orf42A0A1B0GVH6 325 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 SHOX2O60902 331 aaPredicted RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 CILPO75339 1184 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 C8BP07358 591 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 DNAJA1P31689 397 aaKnown RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 WASP42768 502 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 PLA2G16P53816 162 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ZFPM1Q8IX07 1006 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ZNF101Q8IZC7 436 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 SLC25A36Q96CQ1 311 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 HMCESQ96FZ2 354 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 KCNIP3Q9Y2W7 256 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ABCA6Q8N139 1617 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ENPP3O14638 875 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ILF3Q12906 894 aaKnown RBP eCLIP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 TUSC3Q13454 348 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 SYT16Q17RD7 645 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 FOXR2Q6PJQ5 311 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 TMEM220Q6QAJ8 160 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 STON2Q8WXE9 905 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ADAD1Q96M93 576 aaKnown RBP16.84■□□□□ 0.29
ITGB4-201ENST00000200181 ERVW-1Q9UQF0 538 aa16.84■□□□□ 0.29
ITGB4-201ENST00000200181 RHPN2P1A8MT19 583 aa16.83■□□□□ 0.29
ITGB4-201ENST00000200181 LRCH4O75427 683 aa16.83■□□□□ 0.29
ITGB4-201ENST00000200181 ATP5A1P25705 553 aaKnown RBP16.83■□□□□ 0.29
ITGB4-201ENST00000200181 SLC6A9P48067 706 aa16.83■□□□□ 0.29
ITGB4-201ENST00000200181 GRHL2Q6ISB3 625 aa16.83■□□□□ 0.29
ITGB4-201ENST00000200181 FAM43BQ6ZT52 329 aaPredicted RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms