RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CHIAQ9BZP6 476 aa11.9□□□□□ -0.5
TSPAN9-201ENST00000011898 AKTIPQ9H8T0 292 aa11.9□□□□□ -0.5
TSPAN9-201ENST00000011898 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.5
TSPAN9-201ENST00000011898 TAS2R9Q9NYW1 312 aa11.9□□□□□ -0.5
TSPAN9-201ENST00000011898 ARL5AQ9Y689 179 aa11.9□□□□□ -0.5
TSPAN9-201ENST00000011898 CITO14578 2027 aa11.9□□□□□ -0.5
TSPAN9-201ENST00000011898 UBE2QL1A1L167 161 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 CASKO14936 926 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 UROSP10746 265 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 FOSL1P15407 271 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 PCSK6P29122 969 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 TMBIM6P55061 237 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 RHDQ02161 417 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 IL10RBQ08334 325 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 USP45Q70EL2 814 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 TRMT11Q7Z4G4 463 aaKnown RBP11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 OR5H6Q8NGV6 325 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF431Q8TF32 576 aaPredicted RBP11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 ING5Q8WYH8 240 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 COPS8Q99627 209 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 FARSBQ9NSD9 589 aaKnown RBP11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC28A1O00337 649 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 RNASEH2AO75792 299 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 C9P02748 559 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ALDH9A1P49189 494 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 GMFBP60983 142 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 NPTX1Q15818 432 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 SPAG16Q8N0X2 631 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 RNASE11Q8TAA1 199 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 AP3S1Q92572 193 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 RTP4Q96DX8 246 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 FRMD6Q96NE9 622 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ATP13A3Q9H7F0 1226 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC28A3Q9HAS3 691 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 EIF2B4Q9UI10 523 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 MSRAQ9UJ68 235 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TMEM221A6NGB7 291 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TRIM64A6NGJ6 449 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TRIM64BA6NI03 449 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 J3KR12 359 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 NUAK1O60285 661 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC25A14O95258 325 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 APOC3P02656 99 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 CATP04040 527 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 IL7P13232 177 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 F8A1P23610 371 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 HSPA7P48741 367 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 POLR2LP62875 67 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 HERVK_113P63132 956 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ZMYND11Q15326 602 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 FBXO46Q6PJ61 603 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF773Q6PK81 442 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 PIWIL3Q7Z3Z3 882 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TICAM1Q8IUC6 712 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TP53INP1Q96A56 240 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 RBM4BQ9BQ04 359 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 RBM4Q9BWF3 364 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ERVK-6Q9BXR3 956 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 FBRSL1Q9HCM7 1045 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 C14orf119Q9NWQ9 140 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 MCUBQ9NWR8 336 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 STON1Q9Y6Q2 735 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 SNNO75324 88 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 PEX14O75381 377 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 FUCA1P04066 466 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 CCL5P13501 91 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TCF3P15923 654 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 STAT5AP42229 794 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 CDC42P60953 191 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 PABPC1LQ4VXU2 614 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 ARHGAP15Q53QZ3 475 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 FOXB2Q5VYV0 432 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 OTOP2Q7RTS6 562 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TADA1Q96BN2 335 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC7A5P2Q9GIP4 190 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 TIGARQ9NQ88 270 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 CEPT1Q9Y6K0 416 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 CACNA1GO43497 2377 aa11.89□□□□□ -0.51
TSPAN9-201ENST00000011898 DOCK3Q8IZD9 2030 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 GABRDO14764 452 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 BCAS2O75934 225 aaPredicted RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 RPLP0P05388 317 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 UMPSP11172 480 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 GLDCP23378 1020 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 IL4RP24394 825 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CHSY3Q70JA7 882 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 PIM3Q86V86 326 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 TBC1D19Q8N5T2 526 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 BPIFB1Q8TDL5 484 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 SNAPC3Q92966 411 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 DHRS4Q9BTZ2 278 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CNPPD1Q9BV87 410 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 YTHDF1Q9BYJ9 559 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms