RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Grin3aA2AIR5 1135 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 MipepA6H611 711 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r17E9PYF5 849 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CidecP56198 239 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cntn5P68500 1098 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sec31bQ3TZ89 1158 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Six4Q61321 775 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Hsd3b5Q61694 373 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tead4Q62296 427 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Kirrel1Q80W68 789 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cnpy4Q8BQ47 245 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Txndc11Q8K2W3 948 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Epsti1Q8VDI1 314 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Chil4Q91Z98 402 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 TrmuQ9DAT5 417 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 AgkQ9ESW4 421 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tdp2Q9JJX7 370 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Suv39h1O54864 412 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 TshrP47750 764 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Hoxd13P70217 339 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tbx4P70325 552 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rbm15Q0VBL3 962 aaKnown RBP15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 A630001G21RikQ3UTB2 229 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Bpifb1Q61114 474 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Angptl1Q640P2 490 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Q810N5 247 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Hspbap1Q8BK58 483 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 ScaiQ8C8N2 606 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Eva1bQ8K2Y3 164 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gsg1Q8R1W2 324 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ppp1r8Q8R3G1 351 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Pcdhb16Q91Y03 802 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cers2Q924Z4 380 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rgs18Q99PG4 235 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ssr2Q9CPW5 183 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Q9CXL3 195 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mkrn2Q9ERV1 416 aaKnown RBP15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm35911A0A1D5RLS7 214 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sec14l5B2RXM5 696 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Glyatl3E9Q5L8 290 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Herc6F2Z461 1003 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Lim2P56563 173 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mylk4Q5SUV5 386 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mppe1Q80XL7 396 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Itln1bQ80ZA0 313 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Zmiz2Q8CIE2 920 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Bbox1Q924Y0 387 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 PclafQ9CQX4 110 aaKnown RBP15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mtif3Q9CZD5 276 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Osbpl3Q9DBS9 855 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm12800B1AUV4 484 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 5830411N06RikB3F5L4 1112 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm20695H3BLK7 282 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 MntO08789 591 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Nrp2O35375 931 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Srp54P14576 504 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Scn2bQ56A07 215 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gjc2Q8BQU6 440 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CenpxQ8C4X1 78 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Bloc1s5Q8R015 185 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Kdelr3Q8R1L4 214 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Eml3Q8VC03 897 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Clstn3Q99JH7 956 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Krcc1Q99JT5 256 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ddx50Q99MJ9 734 aaKnown RBP15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gkn2Q9CQS6 184 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Smok1Q9QYZ4 484 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cdh17Q9R100 827 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Shank3Q4ACU6 1730 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Chil5A0A0G2JDS2 431 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Arhgap36B1AUC7 590 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sox2P48432 319 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Clca4bQ3UW98 925 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc29a2Q61672 456 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Med22Q62276 200 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr1080Q7TR67 313 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sec22cQ8BXT9 303 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Phtf2Q8CB19 747 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ppwd1Q8CEC6 646 aaKnown RBP15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Pcdhgb2Q91XX7 928 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Aco2Q99KI0 780 aaKnown RBP15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 PacrglQ9D3X5 248 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cntd1Q9D995 334 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 SqorQ9R112 450 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r94E9PZK8 818 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 2610021A01RikE9Q0Q3 834 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r35E9Q7U8 861 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 G430095P16RikE9Q913 147 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Spdye4cI6XKQ3 339 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 P01652 108 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Arpc4P59999 168 aaKnown RBP15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 SbplQ3TUY3 232 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Kiaa0895Q7TQE7 519 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 B3gnt5Q8BGY6 376 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 TiprlQ8BH58 271 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc46a2Q8CA03 479 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mrpl19Q9D338 292 aaKnown RBP15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ing1Q9QXV3 279 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 B9d1Q9R1S0 204 aa15.23■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CercamA3KGW5 592 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms