RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Man1b1A2AJ15 658 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Mllt3A2AM29 569 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Pramef20B1ARV6 477 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 S100zB9EJL3 99 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 E030030I06RikJ3QML9 246 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Mbl1P39039 239 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 TfamP40630 243 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Slc16a12Q8BGC3 486 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Cyp20a1Q8BKE6 462 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Gucy1b2Q8BXH3 824 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Defb19Q8K3I8 83 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Maged1Q9QYH6 775 aaKnown RBP17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Sgk2Q9QZS5 367 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 PtprdQ64487 1912 aa17.98■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Gm11236J3QMS7 360 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Il1rnP25085 178 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Mmp11Q02853 492 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Tapt1Q4VBD2 564 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Nfatc2Q60591 927 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Wnt8aQ64527 354 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Krt72Q6IME9 520 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Snx31Q6P8Y7 439 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Tmem184bQ8BG09 407 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Tbc1d10bQ8BHL3 798 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Map4k5Q8BPM2 847 aaKnown RBP17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Ntmt1Q8R2U4 223 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Brd8Q8R3B7 951 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Olfr866Q8VFI7 312 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Mrgpra2Q91WW4 305 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Pcdhb8Q91XZ2 779 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Nuf2Q99P69 463 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Syndig1A2ANU3 258 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Gm2237E9Q501 211 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Gm3591K7N6X2 186 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Scamp3O35609 349 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Cd93O89103 644 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Faf1P54731 649 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Sec1P97353 368 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Zfp39Q02525 718 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Cyp2c65Q148B1 490 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Usp39Q3TIX9 564 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Hk3Q3TRM8 922 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Lpcat4Q6NVG1 524 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Olfr1197Q7TR13 314 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Olfr1196Q7TR14 314 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 BroxQ8K2Q7 411 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Vmn1r84Q8R284 318 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Ndufb5Q9CQH3 189 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Det1Q9D0A0 550 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Kat8Q9D1P2 458 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Adamts5Q9R001 930 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Stau1Q9Z108 487 aaKnown RBP17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 RgrQ9Z2B3 291 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 CroccQ8CJ40 2009 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Unc80Q8BLN6 3261 aa17.97■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 HttP42859 3119 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Trim12cD3Z3L3 497 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Apol11bE9PUZ0 337 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Vmn2r112L7N221 857 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Hnf1bP27889 558 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Isl1P61372 349 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 MybphP70402 483 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 A1bgQ19LI2 512 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Gdpgp1Q3TLS3 386 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Fam20cQ5MJS3 579 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Tnpo3Q6P2B1 923 aaKnown RBP17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Rbm11Q80YT9 238 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 ChdhQ8BJ64 596 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Nlrp10Q8CCN1 673 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Rnf219Q8K2Y0 722 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Vps4aQ8VEJ9 437 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Olfr1353Q8VGU8 309 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 MINDY3Q9CV28 444 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Ilf2Q9CXY6 390 aaKnown RBP17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Q9D5Y0 588 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Sirpb1aA0A0A6YYP6 397 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Otud3B1AZ99 396 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 MlxO08609 298 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 PigfO09101 219 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Nfkb1P25799 971 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 BgnP28653 369 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Ptpn6P29351 595 aaKnown RBP17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 ErfP70459 551 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Cxcr5Q04683 374 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 SobpQ0P5V2 864 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Zfyve1Q810J8 777 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Fam126bQ8C729 530 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Vmn1r38Q8R2E1 302 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Elp2Q91WG4 831 aaKnown RBP17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 DgkgQ91WG7 788 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 TrabdQ99JY4 376 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 MajinQ9D992 256 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Nmnat1Q9EPA7 285 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Fezf2Q9ESP5 455 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 PcntP48725 2898 aa17.96■□□□□ 0.47
Ccdc3-201ENSMUST00000027988 Akap17bA2A3V1 959 aa17.95■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Zfp563B8JJZ9 448 aa17.95■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Gnpda1O88958 289 aa17.95■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 P06324 132 aa17.95■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 SynaQ5G5D5 617 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms