RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 4930558K02RikE0CXC6 182 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Olfr726E9Q8X3 321 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Hmox2O70252 315 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 InhaQ04997 366 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Olfr725Q05A45 321 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zfp868Q3UTQ6 422 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm5800Q497L3 186 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 MelkQ61846 643 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 SprnQ8BWU1 147 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ttc24Q8BYG0 334 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 MafaQ8CF90 359 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Adgrg3Q8R0T6 542 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Acsm1Q91VA0 573 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Abtb1Q99LJ2 478 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mrpl45Q9D0Q7 306 aaKnown RBP16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 MrrfQ9D6S7 262 aaKnown RBP16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mcf2A2AEU1 1111 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 CntfP51642 198 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Crybb2P62696 205 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Glb1l2Q3UPY5 636 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Akr1clQ3UXL1 322 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 DazlQ64368 298 aaKnown RBP16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Noc4lQ8BHY2 516 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ticam2Q8BJQ4 232 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Tmem260Q8BMD6 703 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mpp7Q8BVD5 576 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Smco1Q8CEZ1 214 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mta3Q924K8 591 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cacng4Q9JJV4 327 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Erich1E9PY43 332 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm10608E9PZ13 166 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Il1rl1P14719 567 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cst3P21460 140 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 SykP48025 629 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Efna1P52793 205 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Arpc4P59999 168 aaKnown RBP16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Hrh1P70174 488 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Spata6Q3U6K5 488 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Sephs1Q8BH69 392 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Appl1Q8K3H0 707 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Chchd4Q8VEA4 139 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ctu1Q99J10 420 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Prokr1Q9JKL1 393 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Tas2r119Q9JKT2 335 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ifngr1P15261 477 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 TdgP56581 421 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ext2P70428 718 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Usp39Q3TIX9 564 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cldn34b4Q3V0X2 211 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gpalpp1Q69ZC8 346 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mfn2Q80U63 757 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Arhgap11aQ80Y19 987 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ddx52Q8K301 598 aaKnown RBP16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Dlg2Q91XM9 852 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fars2Q99M01 451 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 PyurfQ9D1C3 112 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rnase10Q9D5A9 208 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Smg9Q9DB90 520 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Slc5a3Q9JKZ2 718 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 B9d1Q9R1S0 204 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 8030474K03RikE9Q4Y8 554 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ptch2O35595 1182 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ctla2aP12399 137 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rps3P62908 243 aaKnown RBP16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fam131bQ3TY60 332 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zfp512bQ6PHP4 879 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Vmn1r81Q8R286 306 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Micu1Q8VCX5 477 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cd209dQ91ZW8 237 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Plekhj1Q9D240 164 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Tor3aQ9ER38 385 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Prss16Q9QXE5 509 aa16.49■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Vmn2r97K7N6Z2 861 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm10324L7N208 604 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 MgllO35678 303 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ccdc153P0C7Q1 202 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Traf2P39429 501 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 GmpsQ3THK7 693 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Clca4bQ3UW98 925 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Armc5Q5EBP3 926 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zfp324Q78F42 583 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 VcpkmtQ8C436 228 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Vmn1r84Q8R284 318 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Klhl25Q8R2P1 589 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Hdac11Q91WA3 347 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 VasnQ9CZT5 673 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 GrifinQ9D1U0 144 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Dctn3Q9Z0Y1 186 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm5485A0A1D5RM98 91 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Skint9A7TZG3 319 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fam124aD3Z5V4 536 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Spdye4cI6XKQ3 339 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ntsr2P70310 416 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Vipr1P97751 459 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cyp2j13Q3UNV4 503 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Snta1Q61234 503 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Has1Q61647 583 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zc3h11aQ6NZF1 792 aaKnown RBP16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Pik3cbQ8BTI9 1064 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 SharpinQ91WA6 380 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms