RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Haus5Q9D786 619 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Hmg20aQ9DC33 346 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 RhoaQ9QUI0 193 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Spin2gA0A0N4SW15 236 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm4869A0A1B0GSG7 984 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Rad21l1A2AU37 552 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Esp31A8R0W3 114 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Spin2eJ3QNQ0 234 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Nat2P50295 290 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Fpr-rs6Q3SXG2 339 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 RogdiQ3TDK6 287 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Trappc9Q3U0M1 1148 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tmem247Q497K7 211 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 HjurpQ6PG16 667 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Scn4bQ7M729 228 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zc3hav1lQ8BFR1 296 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cpsf4Q8BQZ5 211 aaKnown RBP15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ttc39cQ8VE09 580 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cyp4f3Q99N16 524 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Dhrs7Q9CXR1 338 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tex47Q9D5W8 253 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 HgfacQ9R098 653 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Epm2aQ9WUA5 330 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc25a14Q9Z2B2 325 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Galnt1O08912 559 aaKnown RBP15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Fkbp7O54998 218 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 FiglaO55208 194 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ccser2Q3UHI0 833 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Usp17laQ61068 526 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Hfe2Q7TQ32 420 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zc3h14Q8BJ05 735 aaKnown RBP15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Trim31Q8R0K2 507 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 RorbQ8R1B8 470 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ptgr2Q8VDQ1 351 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gpn2Q8VEJ1 310 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 VitQ8VHI5 650 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 AclyQ91V92 1091 aaKnown RBP15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ribc2Q9D4Q1 309 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 P33monoxQ9DBN4 303 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cyp2g1Q9WV19 494 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr1215A3KGY3 312 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tex28B1AYN9 409 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn2r112L7N221 857 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ppef1O35655 650 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 BadQ61337 204 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Wnt8aQ64527 354 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Fam126aQ6P9N1 521 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Dlgap3Q6PFD5 977 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Bend5Q8C6D4 421 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr985Q8VGB4 311 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 SelenomQ8VHC3 145 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 EedQ921E6 441 aaKnown RBP15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Q99LU8 229 aa15.87■□□□□ 0.13
Trim28-201ENSMUST00000005705 Chil5A0A0G2JDS2 431 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Aldoart2A6ZI47 364 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zfp780bE9Q2S6 806 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn2r35E9Q7U8 861 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm7535F7CXE4 302 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 2210016F16RikG3X8U3 338 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 AldocP05063 363 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 JunbP09450 344 aaKnown RBP15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 MaptP10637 733 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gnrh1P13562 90 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 CtsdP18242 410 aaKnown RBP15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 H2-M3Q31093 336 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zfp607aQ3TQG9 686 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sbf1Q6ZPE2 1867 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tas2r131Q7M708 310 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Znf473Q8BI67 892 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pin4Q9CWW6 131 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tspan11Q9D1D1 253 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr706Q9EPF8 316 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 VapaQ9WV55 249 aaKnown RBP15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Kcna10B2RQA1 511 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 FanceB8JJD6 213 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cdh18E9Q9Q6 790 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm20441G3UYJ7 252 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Akap3O88987 864 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 H2-AaP01910 256 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 StacP97306 403 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 ArvcfP98203 962 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gjb5Q02739 271 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cpne7Q0VE82 557 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Defb14Q7TNV9 67 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cyth4Q80YW0 393 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Psmd11Q8BG32 422 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc16a12Q8BGC3 486 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Steap3Q8CI59 488 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tmem246Q91YV9 403 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Npffr2Q924H0 417 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tmem9Q9CR23 183 aa15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 Clic1Q9Z1Q5 241 aaKnown RBP15.86■□□□□ 0.13
Trim28-201ENSMUST00000005705 PbsnO08976 174 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cldn2O88552 230 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Itgb1P09055 798 aaKnown RBP15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc2a2P14246 523 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 H2-D1P14427 368 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sept4P28661 478 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Emx1Q04742 257 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Trmt10cQ3UFY8 414 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms