RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
PHGDH-233ENST00000642021 PPP1R9BQ96SB3 815 aa16.95■□□□□ 0.3
PHGDH-233ENST00000642021 ZNF445P59923 1031 aa16.94■□□□□ 0.3
PHGDH-233ENST00000642021 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
PHGDH-233ENST00000642021 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
PHGDH-233ENST00000642021 NEK4P51957 841 aa16.94■□□□□ 0.3
PHGDH-233ENST00000642021 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
PHGDH-233ENST00000642021 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-233ENST00000642021 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-233ENST00000642021 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
PHGDH-233ENST00000642021 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
PHGDH-233ENST00000642021 CCDC173Q0VFZ6 552 aa16.93■□□□□ 0.3
PHGDH-233ENST00000642021 FLIIQ13045 1269 aa16.93■□□□□ 0.3
PHGDH-233ENST00000642021 TMX3Q96JJ7 454 aa16.93■□□□□ 0.3
PHGDH-233ENST00000642021 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 KDRP35968 1356 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 FKBP5Q13451 457 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-233ENST00000642021 ESYT1Q9BSJ8 1104 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 RBSNQ9H1K0 784 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
PHGDH-233ENST00000642021 PDIA4P13667 645 aaKnown RBP16.92■□□□□ 0.3
PHGDH-233ENST00000642021 AMPHP49418 695 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 STK31Q9BXU1 1019 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
PHGDH-233ENST00000642021 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-233ENST00000642021 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
PHGDH-233ENST00000642021 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
PHGDH-233ENST00000642021 FLT4P35916 1363 aa16.91■□□□□ 0.3
PHGDH-233ENST00000642021 MX1P20591 662 aa16.91■□□□□ 0.3
PHGDH-233ENST00000642021 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
PHGDH-233ENST00000642021 SBNO1A3KN83 1393 aa16.91■□□□□ 0.3
PHGDH-233ENST00000642021 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
PHGDH-233ENST00000642021 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-233ENST00000642021 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
PHGDH-233ENST00000642021 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
PHGDH-233ENST00000642021 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
PHGDH-233ENST00000642021 CHMLP26374 656 aa16.89■□□□□ 0.3
PHGDH-233ENST00000642021 AMOTL2Q9Y2J4 779 aa16.89■□□□□ 0.3
PHGDH-233ENST00000642021 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.3
PHGDH-233ENST00000642021 FGD1P98174 961 aa16.89■□□□□ 0.29
PHGDH-233ENST00000642021 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
PHGDH-233ENST00000642021 NGDNQ8NEJ9 315 aaKnown RBP16.89■□□□□ 0.29
PHGDH-233ENST00000642021 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
PHGDH-233ENST00000642021 IL25Q9H293 177 aa16.89■□□□□ 0.29
PHGDH-233ENST00000642021 TRIM6-TRIM34B2RNG4 842 aa16.89■□□□□ 0.29
PHGDH-233ENST00000642021 CEBPAP49715 358 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-233ENST00000642021 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
PHGDH-233ENST00000642021 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.29
PHGDH-233ENST00000642021 TTC21AQ8NDW8 1320 aa16.88■□□□□ 0.29
PHGDH-233ENST00000642021 GNAI3P08754 354 aa16.88■□□□□ 0.29
PHGDH-233ENST00000642021 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
PHGDH-233ENST00000642021 ANO2Q9NQ90 1003 aa16.88■□□□□ 0.29
PHGDH-233ENST00000642021 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
PHGDH-233ENST00000642021 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
PHGDH-233ENST00000642021 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
PHGDH-233ENST00000642021 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
PHGDH-233ENST00000642021 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
PHGDH-233ENST00000642021 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
PHGDH-233ENST00000642021 NLRP6P59044 892 aa16.86■□□□□ 0.29
PHGDH-233ENST00000642021 CUL4AQ13619 759 aa16.86■□□□□ 0.29
PHGDH-233ENST00000642021 ZSCAN30Q86W11 494 aa16.86■□□□□ 0.29
PHGDH-233ENST00000642021 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
PHGDH-233ENST00000642021 STAP2Q9UGK3 403 aa16.86■□□□□ 0.29
PHGDH-233ENST00000642021 BRD1O95696 1058 aa16.85■□□□□ 0.29
PHGDH-233ENST00000642021 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
PHGDH-233ENST00000642021 SYCE3A1L190 88 aa16.85■□□□□ 0.29
PHGDH-233ENST00000642021 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-233ENST00000642021 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
PHGDH-233ENST00000642021 HOXC9P31274 260 aa16.84■□□□□ 0.29
PHGDH-233ENST00000642021 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
PHGDH-233ENST00000642021 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-233ENST00000642021 MCM2P49736 904 aa16.83■□□□□ 0.28
PHGDH-233ENST00000642021 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-233ENST00000642021 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-233ENST00000642021 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-233ENST00000642021 PDLIM2Q96JY6 352 aa16.83■□□□□ 0.28
PHGDH-233ENST00000642021 ANAPC15P60006 121 aa16.82■□□□□ 0.28
PHGDH-233ENST00000642021 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
PHGDH-233ENST00000642021 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-233ENST00000642021 MCCP23508 829 aa16.82■□□□□ 0.28
PHGDH-233ENST00000642021 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
PHGDH-233ENST00000642021 LRSAM1Q6UWE0 723 aa16.82■□□□□ 0.28
PHGDH-233ENST00000642021 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
PHGDH-233ENST00000642021 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.81■□□□□ 0.28
PHGDH-233ENST00000642021 PPP1R42Q7Z4L9 355 aa16.81■□□□□ 0.28
PHGDH-233ENST00000642021 HDGFL1Q5TGJ6 251 aa16.8■□□□□ 0.28
PHGDH-233ENST00000642021 SRCIN1Q9C0H9 1055 aa16.8■□□□□ 0.28
PHGDH-233ENST00000642021 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-233ENST00000642021 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
PHGDH-233ENST00000642021 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
PHGDH-233ENST00000642021 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
PHGDH-233ENST00000642021 INTS4Q96HW7 963 aaKnown RBP16.8■□□□□ 0.28
PHGDH-233ENST00000642021 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
PHGDH-233ENST00000642021 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
PHGDH-233ENST00000642021 XRN1Q8IZH2 1706 aaKnown RBP16.8■□□□□ 0.28
PHGDH-233ENST00000642021 SOS1Q07889 1333 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-233ENST00000642021 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
PHGDH-233ENST00000642021 IL17RAQ96F46 866 aa16.79■□□□□ 0.28
PHGDH-233ENST00000642021 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
PHGDH-233ENST00000642021 RNF214Q8ND24 703 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms