RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 SYCP2Q9BX26 1530 aa10.84□□□□□ -0.67
CASC19-227ENST00000641411 UNC13BO14795 1591 aa10.83□□□□□ -0.68
CASC19-227ENST00000641411 TEX14Q8IWB6 1497 aa10.82□□□□□ -0.68
CASC19-227ENST00000641411 KIF15Q9NS87 1388 aa10.82□□□□□ -0.68
CASC19-227ENST00000641411 AGERQ15109 404 aa10.82□□□□□ -0.68
CASC19-227ENST00000641411 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
CASC19-227ENST00000641411 LINC00528Q8N1L1 170 aa10.82□□□□□ -0.68
CASC19-227ENST00000641411 ZNF777Q9ULD5 760 aaPredicted RBP10.82□□□□□ -0.68
CASC19-227ENST00000641411 DUOX2Q9NRD8 1548 aa10.8□□□□□ -0.68
CASC19-227ENST00000641411 MAN1A2O60476 641 aa10.8□□□□□ -0.68
CASC19-227ENST00000641411 RTEL1-TNFRSF6BF6WH68 1400 aa10.8□□□□□ -0.68
CASC19-227ENST00000641411 SOS2Q07890 1332 aaPredicted RBP10.8□□□□□ -0.68
CASC19-227ENST00000641411 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
CASC19-227ENST00000641411 ERBINQ96RT1 1412 aa10.79□□□□□ -0.68
CASC19-227ENST00000641411 NUTM2BA6NNL0 878 aaPredicted RBP10.79□□□□□ -0.68
CASC19-227ENST00000641411 NUTM2EB1AL46 878 aaPredicted RBP10.79□□□□□ -0.68
CASC19-227ENST00000641411 UPP2O95045 317 aa10.79□□□□□ -0.68
CASC19-227ENST00000641411 FSHRP23945 695 aa10.79□□□□□ -0.68
CASC19-227ENST00000641411 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
CASC19-227ENST00000641411 C6orf118Q5T5N4 469 aa10.79□□□□□ -0.68
CASC19-227ENST00000641411 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
CASC19-227ENST00000641411 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
CASC19-227ENST00000641411 NUTM2AQ8IVF1 878 aaPredicted RBP10.79□□□□□ -0.68
CASC19-227ENST00000641411 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
CASC19-227ENST00000641411 GPKOWQ92917 476 aaPredicted RBP eCLIP10.79□□□□□ -0.68
CASC19-227ENST00000641411 ARHGEF12Q9NZN5 1544 aa10.79□□□□□ -0.68
CASC19-227ENST00000641411 IQGAP3Q86VI3 1631 aa10.78□□□□□ -0.68
CASC19-227ENST00000641411 PPFIA3O75145 1194 aa10.78□□□□□ -0.68
CASC19-227ENST00000641411 TSC1Q92574 1164 aa10.78□□□□□ -0.68
CASC19-227ENST00000641411 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.69
CASC19-227ENST00000641411 HNRNPMP52272 730 aaKnown RBP eCLIP10.77□□□□□ -0.69
CASC19-227ENST00000641411 DNMT3LQ9UJW3 386 aa10.77□□□□□ -0.69
CASC19-227ENST00000641411 CFAP74Q9C0B2 1584 aa10.77□□□□□ -0.69
CASC19-227ENST00000641411 FAM135AQ9P2D6 1515 aa10.76□□□□□ -0.69
CASC19-227ENST00000641411 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
CASC19-227ENST00000641411 BMP2P12643 396 aa10.76□□□□□ -0.69
CASC19-227ENST00000641411 EMILIN1Q9Y6C2 1016 aa10.76□□□□□ -0.69
CASC19-227ENST00000641411 VASH1Q7L8A9 365 aaPredicted RBP10.75□□□□□ -0.69
CASC19-227ENST00000641411 CCDC116Q8IYX3 515 aa10.75□□□□□ -0.69
CASC19-227ENST00000641411 NUP155O75694 1391 aa10.75□□□□□ -0.69
CASC19-227ENST00000641411 INO80Q9ULG1 1556 aaPredicted RBP10.74□□□□□ -0.69
CASC19-227ENST00000641411 ERFEQ4G0M1 354 aa10.74□□□□□ -0.69
CASC19-227ENST00000641411 TSEN34Q9BSV6 310 aaKnown RBP10.74□□□□□ -0.69
CASC19-227ENST00000641411 UHRF1BP1Q6BDS2 1440 aa10.74□□□□□ -0.69
CASC19-227ENST00000641411 ASXL2Q76L83 1435 aa10.74□□□□□ -0.69
CASC19-227ENST00000641411 ATP10AO60312 1499 aa10.74□□□□□ -0.69
CASC19-227ENST00000641411 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
CASC19-227ENST00000641411 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
CASC19-227ENST00000641411 DEPDC5O75140 1603 aa10.73□□□□□ -0.69
CASC19-227ENST00000641411 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
CASC19-227ENST00000641411 MAGEB6P1A0A0J9YX57 407 aa10.72□□□□□ -0.69
CASC19-227ENST00000641411 L3MBTL2Q969R5 705 aa10.72□□□□□ -0.69
CASC19-227ENST00000641411 RSPH6AQ9H0K4 717 aa10.72□□□□□ -0.69
CASC19-227ENST00000641411 FANCAO15360 1455 aa10.72□□□□□ -0.69
CASC19-227ENST00000641411 Q6ZVU0 165 aa10.71□□□□□ -0.69
CASC19-227ENST00000641411 SLC24A3Q9HC58 644 aa10.71□□□□□ -0.69
CASC19-227ENST00000641411 TRAPPC8Q9Y2L5 1435 aa10.71□□□□□ -0.69
CASC19-227ENST00000641411 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
CASC19-227ENST00000641411 ATP7AQ04656 1500 aa10.69□□□□□ -0.7
CASC19-227ENST00000641411 CTDSPL2Q05D32 466 aa10.69□□□□□ -0.7
CASC19-227ENST00000641411 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.7
CASC19-227ENST00000641411 VWDEQ8N2E2 1590 aa10.69□□□□□ -0.7
CASC19-227ENST00000641411 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
CASC19-227ENST00000641411 SPATA31E1Q6ZUB1 1445 aa10.68□□□□□ -0.7
CASC19-227ENST00000641411 TTLL8A6PVC2 850 aa10.68□□□□□ -0.7
CASC19-227ENST00000641411 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
CASC19-227ENST00000641411 PPP1R26Q5T8A7 1209 aaPredicted RBP10.68□□□□□ -0.7
CASC19-227ENST00000641411 CARD14Q9BXL6 1004 aa10.68□□□□□ -0.7
CASC19-227ENST00000641411 ADGRL1O94910 1474 aa10.68□□□□□ -0.7
CASC19-227ENST00000641411 ZC3H4Q9UPT8 1303 aaKnown RBP10.67□□□□□ -0.7
CASC19-227ENST00000641411 SPINT1O43278 529 aa10.67□□□□□ -0.7
CASC19-227ENST00000641411 KRT76Q01546 638 aa10.67□□□□□ -0.7
CASC19-227ENST00000641411 POLR3EQ9NVU0 708 aa10.67□□□□□ -0.7
CASC19-227ENST00000641411 FKBPLQ9UIM3 349 aa10.67□□□□□ -0.7
CASC19-227ENST00000641411 CDV3Q9UKY7 258 aaKnown RBP10.67□□□□□ -0.7
CASC19-227ENST00000641411 KDM5CP41229 1560 aa10.67□□□□□ -0.7
CASC19-227ENST00000641411 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
CASC19-227ENST00000641411 SPAG9O60271 1321 aaKnown RBP10.66□□□□□ -0.7
CASC19-227ENST00000641411 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
CASC19-227ENST00000641411 GSK3AP49840 483 aa10.66□□□□□ -0.7
CASC19-227ENST00000641411 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
CASC19-227ENST00000641411 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
CASC19-227ENST00000641411 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
CASC19-227ENST00000641411 TET3O43151 1660 aa10.66□□□□□ -0.7
CASC19-227ENST00000641411 LAMC1P11047 1609 aa10.66□□□□□ -0.7
CASC19-227ENST00000641411 PRDM15P57071 1507 aaPredicted RBP10.65□□□□□ -0.7
CASC19-227ENST00000641411 PTSQ03393 145 aa10.65□□□□□ -0.7
CASC19-227ENST00000641411 FBXO31Q5XUX0 539 aaPredicted RBP10.65□□□□□ -0.7
CASC19-227ENST00000641411 GPR161Q8N6U8 529 aaKnown RBP10.65□□□□□ -0.7
CASC19-227ENST00000641411 OCSTAMPQ9BR26 566 aa10.65□□□□□ -0.7
CASC19-227ENST00000641411 NEO1Q92859 1461 aa10.65□□□□□ -0.7
CASC19-227ENST00000641411 GLI2P10070 1586 aa10.65□□□□□ -0.71
CASC19-227ENST00000641411 PLA2R1Q13018 1463 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 HSPA5P11021 654 aaKnown RBP10.64□□□□□ -0.71
CASC19-227ENST00000641411 KCNMA1Q12791 1236 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 CBLBQ13191 982 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 NBPF8Q3BBV2 869 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 KCTD15Q96SI1 283 aaPredicted RBP10.64□□□□□ -0.71
CASC19-227ENST00000641411 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms