RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 CCT4P50991 539 aaKnown RBP25.59■■□□□ 1.69
SP3-208ENST00000640958 ZC3H6P61129 1189 aaKnown RBP25.59■■□□□ 1.69
SP3-208ENST00000640958 FLIIQ13045 1269 aa25.59■■□□□ 1.69
SP3-208ENST00000640958 ABCC6O95255 1503 aa25.59■■□□□ 1.69
SP3-208ENST00000640958 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
SP3-208ENST00000640958 RPAP2Q8IXW5 612 aaPredicted RBP25.57■■□□□ 1.68
SP3-208ENST00000640958 DCTPP1Q9H773 170 aa25.57■■□□□ 1.68
SP3-208ENST00000640958 EIF4A1P60842 406 aaKnown RBP25.57■■□□□ 1.68
SP3-208ENST00000640958 PXDNLA1KZ92 1463 aa25.56■■□□□ 1.68
SP3-208ENST00000640958 NECTIN2Q92692 538 aa25.56■■□□□ 1.68
SP3-208ENST00000640958 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
SP3-208ENST00000640958 MPRIPQ6WCQ1 1025 aa25.55■■□□□ 1.68
SP3-208ENST00000640958 TBC1D32Q96NH3 1257 aa25.55■■□□□ 1.68
SP3-208ENST00000640958 KDM4FA0A1W2PPD8 638 aa25.55■■□□□ 1.68
SP3-208ENST00000640958 C1orf141Q5JVX7 400 aa25.55■■□□□ 1.68
SP3-208ENST00000640958 SLC4A10Q6U841 1118 aa25.55■■□□□ 1.68
SP3-208ENST00000640958 SPATA31A3Q5VYP0 1347 aa25.54■■□□□ 1.68
SP3-208ENST00000640958 HOXB7P09629 217 aa25.54■■□□□ 1.68
SP3-208ENST00000640958 TEFQ10587 303 aa25.54■■□□□ 1.68
SP3-208ENST00000640958 HDGFL1Q5TGJ6 251 aa25.54■■□□□ 1.68
SP3-208ENST00000640958 UPF2Q9HAU5 1272 aaKnown RBP25.54■■□□□ 1.68
SP3-208ENST00000640958 FKBP5Q13451 457 aaPredicted RBP25.54■■□□□ 1.68
SP3-208ENST00000640958 SLC4A3P48751 1232 aa25.52■■□□□ 1.68
SP3-208ENST00000640958 BMP2KLQ5H9B9 411 aa25.52■■□□□ 1.68
SP3-208ENST00000640958 KCNQ3O43525 872 aa25.51■■□□□ 1.67
SP3-208ENST00000640958 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
SP3-208ENST00000640958 BTBD11A6QL63 1104 aa25.5■■□□□ 1.67
SP3-208ENST00000640958 CABLES1Q8TDN4 633 aa25.5■■□□□ 1.67
SP3-208ENST00000640958 BRINP3Q76B58 766 aa25.49■■□□□ 1.67
SP3-208ENST00000640958 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
SP3-208ENST00000640958 CPDO75976 1380 aa25.48■■□□□ 1.67
SP3-208ENST00000640958 MEGF6O75095 1541 aa25.48■■□□□ 1.67
SP3-208ENST00000640958 PHAXQ9H814 394 aaKnown RBP25.46■■□□□ 1.67
SP3-208ENST00000640958 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
SP3-208ENST00000640958 PKD1L3Q7Z443 1732 aa25.46■■□□□ 1.67
SP3-208ENST00000640958 HEG1Q9ULI3 1381 aa25.46■■□□□ 1.67
SP3-208ENST00000640958 PLEKHG2Q9H7P9 1386 aa25.45■■□□□ 1.67
SP3-208ENST00000640958 NBR1Q14596 966 aa25.45■■□□□ 1.66
SP3-208ENST00000640958 GNAI2P04899 355 aa25.45■■□□□ 1.66
SP3-208ENST00000640958 EIF2S2P20042 333 aaKnown RBP25.45■■□□□ 1.66
SP3-208ENST00000640958 MFAP1P55081 439 aaKnown RBP25.45■■□□□ 1.66
SP3-208ENST00000640958 RAPGEF4Q8WZA2 1011 aa25.45■■□□□ 1.66
SP3-208ENST00000640958 CHMP4AQ9BY43 222 aa25.45■■□□□ 1.66
SP3-208ENST00000640958 ZNF335Q9H4Z2 1342 aaPredicted RBP25.44■■□□□ 1.66
SP3-208ENST00000640958 HMMRO75330 724 aa25.44■■□□□ 1.66
SP3-208ENST00000640958 PLEKHM2Q8IWE5 1019 aa25.44■■□□□ 1.66
SP3-208ENST00000640958 GNAI3P08754 354 aa25.43■■□□□ 1.66
SP3-208ENST00000640958 CHPF2Q9P2E5 772 aa25.43■■□□□ 1.66
SP3-208ENST00000640958 KDM6AO15550 1401 aaPredicted RBP25.43■■□□□ 1.66
SP3-208ENST00000640958 CHRNA2Q15822 529 aa25.43■■□□□ 1.66
SP3-208ENST00000640958 TATP17735 454 aaPredicted RBP25.42■■□□□ 1.66
SP3-208ENST00000640958 C22orf23Q9BZE7 217 aa25.42■■□□□ 1.66
SP3-208ENST00000640958 ABCA3Q99758 1704 aa25.42■■□□□ 1.66
SP3-208ENST00000640958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.4■■□□□ 1.663e-7■□□□□ 11.3
SP3-208ENST00000640958 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
SP3-208ENST00000640958 CSB-PGBD3P0DP91 1061 aa25.39■■□□□ 1.66
SP3-208ENST00000640958 GSPT1P15170 499 aaKnown RBP25.39■■□□□ 1.66
SP3-208ENST00000640958 GIGYF1O75420 1035 aaPredicted RBP25.39■■□□□ 1.65
SP3-208ENST00000640958 MRC1P22897 1456 aa25.38■■□□□ 1.65
SP3-208ENST00000640958 PHKG2P15735 406 aa25.38■■□□□ 1.65
SP3-208ENST00000640958 BECN1Q14457 450 aa25.38■■□□□ 1.65
SP3-208ENST00000640958 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
SP3-208ENST00000640958 USP44Q9H0E7 712 aa25.38■■□□□ 1.65
SP3-208ENST00000640958 SPG7Q9UQ90 795 aa25.38■■□□□ 1.65
SP3-208ENST00000640958 C5P01031 1676 aa25.38■■□□□ 1.65
SP3-208ENST00000640958 SLAIN2Q9P270 581 aa25.37■■□□□ 1.65
SP3-208ENST00000640958 SMARCA5O60264 1052 aaPredicted RBP25.37■■□□□ 1.65
SP3-208ENST00000640958 OTUD7AQ8TE49 926 aaPredicted RBP25.37■■□□□ 1.65
SP3-208ENST00000640958 TTC22Q5TAA0 569 aa25.36■■□□□ 1.65
SP3-208ENST00000640958 ATP8B2P98198 1209 aa25.36■■□□□ 1.65
SP3-208ENST00000640958 DBF4Q9UBU7 674 aaPredicted RBP25.36■■□□□ 1.65
SP3-208ENST00000640958 PARP4Q9UKK3 1724 aaKnown RBP25.35■■□□□ 1.65
SP3-208ENST00000640958 ADCY9O60503 1353 aa25.35■■□□□ 1.65
SP3-208ENST00000640958 ANXA1P04083 346 aa25.35■■□□□ 1.65
SP3-208ENST00000640958 TBC1D9Q6ZT07 1266 aa25.35■■□□□ 1.65
SP3-208ENST00000640958 SRCIN1Q9C0H9 1055 aa25.35■■□□□ 1.65
SP3-208ENST00000640958 LRRFIP2Q9Y608 721 aaKnown RBP25.35■■□□□ 1.65
SP3-208ENST00000640958 NHSL1Q5SYE7 1610 aa25.35■■□□□ 1.65
SP3-208ENST00000640958 DNAAF4Q8WXU2 420 aa25.34■■□□□ 1.65
SP3-208ENST00000640958 SLC52A2Q9HAB3 445 aa25.34■■□□□ 1.65
SP3-208ENST00000640958 PNMA6EA0A0J9YXQ4 647 aa25.34■■□□□ 1.65
SP3-208ENST00000640958 APBB1O00213 710 aa25.34■■□□□ 1.65
SP3-208ENST00000640958 UBTFL1P0CB47 393 aaPredicted RBP25.33■■□□□ 1.65
SP3-208ENST00000640958 BEND3Q5T5X7 828 aa25.33■■□□□ 1.65
SP3-208ENST00000640958 IFNL2Q8IZJ0 200 aa25.33■■□□□ 1.65
SP3-208ENST00000640958 PRAMEF22A3QJZ6 481 aa25.33■■□□□ 1.64
SP3-208ENST00000640958 PI4KAP2A4QPH2 592 aa25.33■■□□□ 1.64
SP3-208ENST00000640958 CDC45O75419 566 aa25.33■■□□□ 1.64
SP3-208ENST00000640958 RBM25P49756 843 aaKnown RBP25.33■■□□□ 1.64
SP3-208ENST00000640958 PI4KAP1Q8N8J0 262 aa25.33■■□□□ 1.64
SP3-208ENST00000640958 TUBGCP6Q96RT7 1819 aa25.31■■□□□ 1.64
SP3-208ENST00000640958 TBC1D2Q9BYX2 928 aa25.31■■□□□ 1.64
SP3-208ENST00000640958 CYP27B1O15528 508 aa25.31■■□□□ 1.64
SP3-208ENST00000640958 PROSER3Q2NL68 480 aa25.31■■□□□ 1.64
SP3-208ENST00000640958 EXOC6BQ9Y2D4 811 aa25.31■■□□□ 1.64
SP3-208ENST00000640958 ZNF790Q6PG37 636 aa25.3■■□□□ 1.64
SP3-208ENST00000640958 IBTKQ9P2D0 1353 aaPredicted RBP25.3■■□□□ 1.64
SP3-208ENST00000640958 PRDM11Q9NQV5 511 aa25.29■■□□□ 1.64
SP3-208ENST00000640958 COL5A2P05997 1499 aaPredicted RBP25.29■■□□□ 1.64
SP3-208ENST00000640958 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms