RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
PAX6-280ENST00000640872 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
PAX6-280ENST00000640872 AEBP1Q8IUX7 1158 aa16.67■□□□□ 0.26
PAX6-280ENST00000640872 NUDT16Q96DE0 195 aaKnown RBP16.67■□□□□ 0.26
PAX6-280ENST00000640872 AKAP12Q02952 1782 aa16.67■□□□□ 0.26
PAX6-280ENST00000640872 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
PAX6-280ENST00000640872 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
PAX6-280ENST00000640872 ESYT1Q9BSJ8 1104 aa16.66■□□□□ 0.26
PAX6-280ENST00000640872 ROBO2Q9HCK4 1378 aa16.66■□□□□ 0.26
PAX6-280ENST00000640872 DYNC1I1O14576 645 aa16.66■□□□□ 0.26
PAX6-280ENST00000640872 RNF214Q8ND24 703 aa16.66■□□□□ 0.26
PAX6-280ENST00000640872 SLC26A8Q96RN1 970 aa16.66■□□□□ 0.26
PAX6-280ENST00000640872 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
PAX6-280ENST00000640872 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
PAX6-280ENST00000640872 TSPY26PQ9H489 355 aa16.65■□□□□ 0.26
PAX6-280ENST00000640872 ANAPC15P60006 121 aa16.65■□□□□ 0.26
PAX6-280ENST00000640872 MCM10Q7L590 875 aa16.65■□□□□ 0.26
PAX6-280ENST00000640872 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
PAX6-280ENST00000640872 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.26
PAX6-280ENST00000640872 CRB1P82279 1406 aa16.64■□□□□ 0.25
PAX6-280ENST00000640872 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
PAX6-280ENST00000640872 SULT6B1Q6IMI4 303 aa16.64■□□□□ 0.25
PAX6-280ENST00000640872 ITSN1Q15811 1721 aa16.64■□□□□ 0.25
PAX6-280ENST00000640872 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
PAX6-280ENST00000640872 SLC4A2P04920 1241 aa16.64■□□□□ 0.25
PAX6-280ENST00000640872 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
PAX6-280ENST00000640872 ADAMTS13Q76LX8 1427 aa16.63■□□□□ 0.25
PAX6-280ENST00000640872 MCCP23508 829 aa16.63■□□□□ 0.25
PAX6-280ENST00000640872 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
PAX6-280ENST00000640872 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
PAX6-280ENST00000640872 RGPD1P0DJD0 1748 aa16.63■□□□□ 0.25
PAX6-280ENST00000640872 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
PAX6-280ENST00000640872 MTERF4Q7Z6M4 381 aaKnown RBP16.62■□□□□ 0.25
PAX6-280ENST00000640872 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
PAX6-280ENST00000640872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
PAX6-280ENST00000640872 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
PAX6-280ENST00000640872 CHMLP26374 656 aa16.61■□□□□ 0.25
PAX6-280ENST00000640872 G2E3Q7L622 706 aa16.61■□□□□ 0.25
PAX6-280ENST00000640872 EXOC6BQ9Y2D4 811 aa16.61■□□□□ 0.25
PAX6-280ENST00000640872 KIAA2012Q0VF49 1180 aa16.6■□□□□ 0.25
PAX6-280ENST00000640872 TECPR2O15040 1411 aa16.6■□□□□ 0.25
PAX6-280ENST00000640872 F6X3S4 739 aa16.6■□□□□ 0.25
PAX6-280ENST00000640872 MX1P20591 662 aa16.6■□□□□ 0.25
PAX6-280ENST00000640872 GADD45BO75293 160 aaPredicted RBP16.59■□□□□ 0.25
PAX6-280ENST00000640872 PHF14O94880 888 aa16.59■□□□□ 0.25
PAX6-280ENST00000640872 GNAI2P04899 355 aa16.59■□□□□ 0.25
PAX6-280ENST00000640872 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
PAX6-280ENST00000640872 PTMAP06454 111 aaKnown RBP16.59■□□□□ 0.25
PAX6-280ENST00000640872 SLC4A10Q6U841 1118 aa16.59■□□□□ 0.25
PAX6-280ENST00000640872 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
PAX6-280ENST00000640872 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
PAX6-280ENST00000640872 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.25
PAX6-280ENST00000640872 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 FAM184AQ8NB25 1140 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 STAP2Q9UGK3 403 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 PTPRUQ92729 1446 aa16.58■□□□□ 0.24
PAX6-280ENST00000640872 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
PAX6-280ENST00000640872 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
PAX6-280ENST00000640872 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
PAX6-280ENST00000640872 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
PAX6-280ENST00000640872 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
PAX6-280ENST00000640872 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
PAX6-280ENST00000640872 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 UPF3BQ9BZI7 483 aaKnown RBP16.56■□□□□ 0.24
PAX6-280ENST00000640872 PRDM4Q9UKN5 801 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 NALCNQ8IZF0 1738 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 XRN1Q8IZH2 1706 aaKnown RBP16.56■□□□□ 0.24
PAX6-280ENST00000640872 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 EPB41L2O43491 1005 aaKnown RBP16.56■□□□□ 0.24
PAX6-280ENST00000640872 MYRIPQ8NFW9 859 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 MIS18AQ9NYP9 233 aa16.56■□□□□ 0.24
PAX6-280ENST00000640872 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.55■□□□□ 0.24
PAX6-280ENST00000640872 PLEKHG1Q9ULL1 1385 aa16.55■□□□□ 0.24
PAX6-280ENST00000640872 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
PAX6-280ENST00000640872 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
PAX6-280ENST00000640872 ATP8B2P98198 1209 aa16.55■□□□□ 0.24
PAX6-280ENST00000640872 UNC5CLQ8IV45 518 aa16.55■□□□□ 0.24
PAX6-280ENST00000640872 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
PAX6-280ENST00000640872 TCHHQ07283 1943 aa16.54■□□□□ 0.24
PAX6-280ENST00000640872 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
PAX6-280ENST00000640872 AOX1Q06278 1338 aa16.54■□□□□ 0.24
PAX6-280ENST00000640872 HSPA4P34932 840 aa16.54■□□□□ 0.24
PAX6-280ENST00000640872 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
PAX6-280ENST00000640872 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
PAX6-280ENST00000640872 IL25Q9H293 177 aa16.54■□□□□ 0.24
PAX6-280ENST00000640872 TSPYL4Q9UJ04 414 aa16.54■□□□□ 0.24
PAX6-280ENST00000640872 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
PAX6-280ENST00000640872 GNAI3P08754 354 aa16.53■□□□□ 0.24
PAX6-280ENST00000640872 CCDC183Q5T5S1 534 aa16.53■□□□□ 0.24
PAX6-280ENST00000640872 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
PAX6-280ENST00000640872 TTC21BQ7Z4L5 1316 aa16.53■□□□□ 0.24
PAX6-280ENST00000640872 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
PAX6-280ENST00000640872 ACEP12821 1306 aa16.53■□□□□ 0.24
PAX6-280ENST00000640872 SMAP1Q8IYB5 467 aaPredicted RBP16.52■□□□□ 0.24
PAX6-280ENST00000640872 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
PAX6-280ENST00000640872 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms