RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 TBC1D32Q96NH3 1257 aa15.88■□□□□ 0.13
SPIN3-243ENST00000640717 IL1RAPL2Q9NP60 686 aa15.88■□□□□ 0.13
SPIN3-243ENST00000640717 PTPRCP08575 1304 aa15.88■□□□□ 0.13
SPIN3-243ENST00000640717 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
SPIN3-243ENST00000640717 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
SPIN3-243ENST00000640717 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
SPIN3-243ENST00000640717 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
SPIN3-243ENST00000640717 NWD1Q149M9 1564 aa15.87■□□□□ 0.13
SPIN3-243ENST00000640717 PXDNQ92626 1479 aa15.87■□□□□ 0.13
SPIN3-243ENST00000640717 GSPT1P15170 499 aaKnown RBP15.87■□□□□ 0.13
SPIN3-243ENST00000640717 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
SPIN3-243ENST00000640717 DEKP35659 375 aaKnown RBP15.86■□□□□ 0.13
SPIN3-243ENST00000640717 ERBB3P21860 1342 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 FRAT2O75474 233 aaPredicted RBP15.86■□□□□ 0.13
SPIN3-243ENST00000640717 AKAP4Q5JQC9 854 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 TBC1D9Q6ZT07 1266 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 PLEKHM2Q8IWE5 1019 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 TBC1D2Q9BYX2 928 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 DCTPP1Q9H773 170 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 NBPF7P0C2Y1 421 aaPredicted RBP15.86■□□□□ 0.13
SPIN3-243ENST00000640717 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
SPIN3-243ENST00000640717 GNAI2P04899 355 aa15.85■□□□□ 0.13
SPIN3-243ENST00000640717 NFKBIBQ15653 356 aa15.85■□□□□ 0.13
SPIN3-243ENST00000640717 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
SPIN3-243ENST00000640717 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
SPIN3-243ENST00000640717 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
SPIN3-243ENST00000640717 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
SPIN3-243ENST00000640717 CCT4P50991 539 aaKnown RBP15.84■□□□□ 0.13
SPIN3-243ENST00000640717 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
SPIN3-243ENST00000640717 BRINP3Q76B58 766 aa15.84■□□□□ 0.13
SPIN3-243ENST00000640717 DDX54Q8TDD1 881 aaKnown RBP15.84■□□□□ 0.13
SPIN3-243ENST00000640717 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
SPIN3-243ENST00000640717 NFAT5O94916 1531 aa15.83■□□□□ 0.13
SPIN3-243ENST00000640717 LTN1O94822 1766 aa15.83■□□□□ 0.12
SPIN3-243ENST00000640717 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.12
SPIN3-243ENST00000640717 RPAP2Q8IXW5 612 aaPredicted RBP15.83■□□□□ 0.12
SPIN3-243ENST00000640717 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
SPIN3-243ENST00000640717 A0A0G2JS52 829 aa15.82■□□□□ 0.12
SPIN3-243ENST00000640717 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
SPIN3-243ENST00000640717 ARXQ96QS3 562 aa15.82■□□□□ 0.12
SPIN3-243ENST00000640717 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
SPIN3-243ENST00000640717 NPHP3Q7Z494 1330 aa15.82■□□□□ 0.12
SPIN3-243ENST00000640717 TATP17735 454 aaPredicted RBP15.81■□□□□ 0.12
SPIN3-243ENST00000640717 BECN1Q14457 450 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 NUTM1Q86Y26 1132 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
SPIN3-243ENST00000640717 BMP2KLQ5H9B9 411 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 MST1RQ04912 1400 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 AMOTQ4VCS5 1084 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 SRCIN1Q9C0H9 1055 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 MAP3K2Q9Y2U5 619 aa15.81■□□□□ 0.12
SPIN3-243ENST00000640717 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
SPIN3-243ENST00000640717 SLAIN2Q9P270 581 aa15.8■□□□□ 0.12
SPIN3-243ENST00000640717 ZNF142P52746 1687 aaPredicted RBP15.8■□□□□ 0.12
SPIN3-243ENST00000640717 SURF6O75683 361 aaKnown RBP15.8■□□□□ 0.12
SPIN3-243ENST00000640717 KIF24Q5T7B8 1368 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 SRGAP3O43295 1099 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 HMMRO75330 724 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 SDSP20132 328 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 TRIM6-TRIM34B2RNG4 842 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
SPIN3-243ENST00000640717 DNAAF4Q8WXU2 420 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 CEMIPQ8WUJ3 1361 aa15.79■□□□□ 0.12
SPIN3-243ENST00000640717 CYP27B1O15528 508 aa15.78■□□□□ 0.12
SPIN3-243ENST00000640717 PTCD1O75127 700 aaKnown RBP15.78■□□□□ 0.12
SPIN3-243ENST00000640717 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
SPIN3-243ENST00000640717 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-243ENST00000640717 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
SPIN3-243ENST00000640717 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-243ENST00000640717 TTC22Q5TAA0 569 aa15.78■□□□□ 0.12
SPIN3-243ENST00000640717 C9orf78Q9NZ63 289 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-243ENST00000640717 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
SPIN3-243ENST00000640717 GNAI3P08754 354 aa15.77■□□□□ 0.12
SPIN3-243ENST00000640717 CCDC9Q9Y3X0 531 aaKnown RBP15.76■□□□□ 0.11
SPIN3-243ENST00000640717 PHKG2P15735 406 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 EVA1CP58658 441 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 ZNF790Q6PG37 636 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 CDC45O75419 566 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 KLHDC4Q8TBB5 520 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 SIL1Q9H173 461 aa15.76■□□□□ 0.11
SPIN3-243ENST00000640717 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
SPIN3-243ENST00000640717 HSP90AA1P07900 732 aaKnown RBP15.75■□□□□ 0.11
SPIN3-243ENST00000640717 NOL8Q76FK4 1167 aaKnown RBP15.75■□□□□ 0.11
SPIN3-243ENST00000640717 DBF4Q9UBU7 674 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-243ENST00000640717 LRRCC1Q9C099 1032 aa15.75■□□□□ 0.11
SPIN3-243ENST00000640717 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 TTC5Q8N0Z6 440 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 PDE1AP54750 535 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 CABP4P57796 275 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 ATP8B2P98198 1209 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 BEND3Q5T5X7 828 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 LARP1Q6PKG0 1096 aaKnown RBP15.74■□□□□ 0.11
SPIN3-243ENST00000640717 UNC5CLQ8IV45 518 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 SPG7Q9UQ90 795 aa15.74■□□□□ 0.11
SPIN3-243ENST00000640717 MEGF6O75095 1541 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms