RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 KIAA2012Q0VF49 1180 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 TAF3Q5VWG9 929 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 IFT57Q9NWB7 429 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 USHBP1Q8N6Y0 703 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 PXDNQ92626 1479 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 API5Q9BZZ5 524 aaKnown RBP7.03□□□□□ -1.28
RTTN-218ENST00000640408 MPRIPQ6WCQ1 1025 aa7.02□□□□□ -1.29
RTTN-218ENST00000640408 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
RTTN-218ENST00000640408 BCL11BQ9C0K0 894 aaPredicted RBP7.02□□□□□ -1.29
RTTN-218ENST00000640408 STK32BQ9NY57 414 aa7.02□□□□□ -1.29
RTTN-218ENST00000640408 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.29
RTTN-218ENST00000640408 ABCC6O95255 1503 aa7.02□□□□□ -1.29
RTTN-218ENST00000640408 HSP90AB3PQ58FF7 597 aa7.02□□□□□ -1.29
RTTN-218ENST00000640408 MSH5O43196 834 aa7.02□□□□□ -1.29
RTTN-218ENST00000640408 SNRPA1P09661 255 aaKnown RBP7.02□□□□□ -1.29
RTTN-218ENST00000640408 SETQ01105 290 aaPredicted RBP7.02□□□□□ -1.29
RTTN-218ENST00000640408 FTSJ3Q8IY81 847 aaKnown RBP7.02□□□□□ -1.29
RTTN-218ENST00000640408 NCAPD2Q15021 1401 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 ERBB4Q15303 1308 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 GOLGA6L1Q8N7Z2 621 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 IL27Q8NEV9 243 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 CFAP44Q96MT7 982 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 KIF16BQ96L93 1317 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 KIF6Q6ZMV9 814 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 AK7Q96M32 723 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 RRP7AQ9Y3A4 280 aaKnown RBP7.01□□□□□ -1.29
RTTN-218ENST00000640408 PHKG2P15735 406 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 ZNF330Q9Y3S2 320 aaPredicted RBP7.01□□□□□ -1.29
RTTN-218ENST00000640408 RNMTO43148 476 aaKnown RBP7.01□□□□□ -1.29
RTTN-218ENST00000640408 HDGFL1Q5TGJ6 251 aa7.01□□□□□ -1.29
RTTN-218ENST00000640408 ZMYND15Q9H091 742 aa7□□□□□ -1.29
RTTN-218ENST00000640408 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
RTTN-218ENST00000640408 GBP4Q96PP9 640 aa7□□□□□ -1.29
RTTN-218ENST00000640408 FBLN1P23142 703 aa7□□□□□ -1.29
RTTN-218ENST00000640408 CSPP1Q1MSJ5 1256 aa7□□□□□ -1.29
RTTN-218ENST00000640408 MTHFSDQ2M296 383 aaKnown RBP7□□□□□ -1.29
RTTN-218ENST00000640408 TAF7LQ5H9L4 462 aa7□□□□□ -1.29
RTTN-218ENST00000640408 APBA3O96018 575 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 AEBP1Q8IUX7 1158 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 AAMPQ13685 434 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 ROBO1Q9Y6N7 1651 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 CCDC66A2RUB6 948 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 SMC4Q9NTJ3 1288 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 DBF4Q9UBU7 674 aaPredicted RBP6.99□□□□□ -1.29
RTTN-218ENST00000640408 AXIN2Q9Y2T1 843 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 KDRP35968 1356 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 SLC27A3Q5K4L6 730 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 HSCBQ8IWL3 235 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 SETD1AO15047 1707 aaKnown RBP6.99□□□□□ -1.29
RTTN-218ENST00000640408 NALCNQ8IZF0 1738 aa6.99□□□□□ -1.29
RTTN-218ENST00000640408 NRDCO43847 1150 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 ZPR1O75312 459 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 PRIM1P49642 420 aaKnown RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 SLC52A2Q9HAB3 445 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 HYPKQ9NX55 129 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 MED1Q15648 1581 aaPredicted RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 CD163L1Q9NR16 1453 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 PHLPP1O60346 1717 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 EIF2S2P20042 333 aaKnown RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 CCNL1Q9UK58 526 aaPredicted RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 RTCBQ9Y3I0 505 aaKnown RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 TWISTNBQ3B726 338 aaPredicted RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 POLD1P28340 1107 aa6.98□□□□□ -1.29
RTTN-218ENST00000640408 NKX1-1Q15270 411 aaPredicted RBP6.98□□□□□ -1.29
RTTN-218ENST00000640408 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
RTTN-218ENST00000640408 SLIT3O75094 1523 aa6.97□□□□□ -1.29
RTTN-218ENST00000640408 COL5A2P05997 1499 aaPredicted RBP6.97□□□□□ -1.29
RTTN-218ENST00000640408 HMMRO75330 724 aa6.97□□□□□ -1.29
RTTN-218ENST00000640408 ATP6V1AP38606 617 aa6.97□□□□□ -1.29
RTTN-218ENST00000640408 RIC3Q7Z5B4 369 aa6.97□□□□□ -1.29
RTTN-218ENST00000640408 ADRA2BP18089 450 aa6.96□□□□□ -1.29
RTTN-218ENST00000640408 NOM1Q5C9Z4 860 aaKnown RBP6.96□□□□□ -1.29
RTTN-218ENST00000640408 ZNF790Q6PG37 636 aa6.96□□□□□ -1.29
RTTN-218ENST00000640408 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.29
RTTN-218ENST00000640408 ONECUT3O60422 494 aaPredicted RBP6.96□□□□□ -1.29
RTTN-218ENST00000640408 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.29
RTTN-218ENST00000640408 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.29
RTTN-218ENST00000640408 FKBP5Q13451 457 aaPredicted RBP6.96□□□□□ -1.3
RTTN-218ENST00000640408 MCM10Q7L590 875 aa6.96□□□□□ -1.3
RTTN-218ENST00000640408 RCAN3Q9UKA8 241 aa6.96□□□□□ -1.3
RTTN-218ENST00000640408 RFC4P35249 363 aa6.96□□□□□ -1.3
RTTN-218ENST00000640408 ALDH1L2Q3SY69 923 aa6.96□□□□□ -1.3
RTTN-218ENST00000640408 PDZRN3Q9UPQ7 1066 aa6.96□□□□□ -1.3
RTTN-218ENST00000640408 DDX11L8A8MPP1 907 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 DUSP27Q5VZP5 1158 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 SLIT2O94813 1529 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 SLC16A10Q8TF71 515 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 TFCP2L1Q9NZI6 479 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 FRAT1Q92837 279 aaPredicted RBP6.95□□□□□ -1.3
RTTN-218ENST00000640408 CHL1O00533 1208 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 GNAI3P08754 354 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 LOC102724428A0A0B4J2F2 783 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 SIK1P57059 783 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 PHACTR3Q96KR7 559 aa6.95□□□□□ -1.3
RTTN-218ENST00000640408 CYP27B1O15528 508 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 TRAPPC3LQ5T215 181 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 ELL2O00472 640 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms