RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 BRPF3Q9ULD4 1205 aa23.43■■□□□ 1.34
CROCCP2-206ENST00000639594 FKBP5Q13451 457 aaPredicted RBP23.42■■□□□ 1.34
CROCCP2-206ENST00000639594 IP6K1Q92551 441 aa23.42■■□□□ 1.34
CROCCP2-206ENST00000639594 SDSP20132 328 aa23.41■■□□□ 1.34
CROCCP2-206ENST00000639594 GNAI2P04899 355 aa23.41■■□□□ 1.34
CROCCP2-206ENST00000639594 BABAM1Q9NWV8 329 aa23.41■■□□□ 1.34
CROCCP2-206ENST00000639594 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.33
CROCCP2-206ENST00000639594 PSME1Q06323 249 aa23.39■■□□□ 1.33
CROCCP2-206ENST00000639594 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
CROCCP2-206ENST00000639594 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
CROCCP2-206ENST00000639594 SOS1Q07889 1333 aaPredicted RBP23.39■■□□□ 1.33
CROCCP2-206ENST00000639594 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
CROCCP2-206ENST00000639594 TUBGCP6Q96RT7 1819 aa23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 K7ELQ4 463 aaPredicted RBP23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 EIF5BO60841 1220 aaKnown RBP23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 USP26Q9BXU7 913 aa23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 ZBTB7CA1YPR0 619 aa23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 EXOC6BQ9Y2D4 811 aa23.37■■□□□ 1.33
CROCCP2-206ENST00000639594 MST1RQ04912 1400 aa23.36■■□□□ 1.33
CROCCP2-206ENST00000639594 GNAI3P08754 354 aa23.36■■□□□ 1.33
CROCCP2-206ENST00000639594 KDM3BQ7LBC6 1761 aa23.35■■□□□ 1.33
CROCCP2-206ENST00000639594 CEMIPQ8WUJ3 1361 aa23.35■■□□□ 1.33
CROCCP2-206ENST00000639594 PHRF1Q9P1Y6 1649 aaKnown RBP23.35■■□□□ 1.33
CROCCP2-206ENST00000639594 FOXD4L1Q9NU39 408 aa23.35■■□□□ 1.33
CROCCP2-206ENST00000639594 PNMA6EA0A0J9YXQ4 647 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 CIZ1Q9ULV3 898 aaPredicted RBP23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 AK9Q5TCS8 1911 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 LMO7Q8WWI1 1683 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 ATF3P18847 181 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 PDE1AP54750 535 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 ATP8B2P98198 1209 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 HDGFL1Q5TGJ6 251 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 OSBPL3Q9H4L5 887 aa23.34■■□□□ 1.33
CROCCP2-206ENST00000639594 PXDNLA1KZ92 1463 aa23.33■■□□□ 1.33
CROCCP2-206ENST00000639594 HSP90AA1P07900 732 aaKnown RBP23.33■■□□□ 1.32
CROCCP2-206ENST00000639594 CASC1Q6TDU7 716 aa23.33■■□□□ 1.32
CROCCP2-206ENST00000639594 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.32
CROCCP2-206ENST00000639594 PHAXQ9H814 394 aaKnown RBP23.33■■□□□ 1.32
CROCCP2-206ENST00000639594 DCCP43146 1447 aa23.32■■□□□ 1.32
CROCCP2-206ENST00000639594 KIF1AQ12756 1690 aa23.32■■□□□ 1.32
CROCCP2-206ENST00000639594 TNPO1Q92973 898 aaKnown RBP23.32■■□□□ 1.32
CROCCP2-206ENST00000639594 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
CROCCP2-206ENST00000639594 RABEP1Q15276 862 aa23.31■■□□□ 1.32
CROCCP2-206ENST00000639594 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
CROCCP2-206ENST00000639594 TRPM3Q9HCF6 1732 aaPredicted RBP23.31■■□□□ 1.32
CROCCP2-206ENST00000639594 TRAK2O60296 914 aa23.31■■□□□ 1.32
CROCCP2-206ENST00000639594 USP44Q9H0E7 712 aa23.31■■□□□ 1.32
CROCCP2-206ENST00000639594 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
CROCCP2-206ENST00000639594 SALL3Q9BXA9 1300 aa23.3■■□□□ 1.32
CROCCP2-206ENST00000639594 EIF4A1P60842 406 aaKnown RBP23.3■■□□□ 1.32
CROCCP2-206ENST00000639594 LRRCC1Q9C099 1032 aa23.3■■□□□ 1.32
CROCCP2-206ENST00000639594 RTN4Q9NQC3 1192 aaKnown RBP23.3■■□□□ 1.32
CROCCP2-206ENST00000639594 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
CROCCP2-206ENST00000639594 DDX11L8A8MPP1 907 aa23.28■■□□□ 1.32
CROCCP2-206ENST00000639594 PLEKHG5O94827 1062 aa23.28■■□□□ 1.32
CROCCP2-206ENST00000639594 EIF2S2P20042 333 aaKnown RBP23.28■■□□□ 1.32
CROCCP2-206ENST00000639594 TSHZ3Q63HK5 1081 aa23.28■■□□□ 1.32
CROCCP2-206ENST00000639594 GZF1Q9H116 711 aaPredicted RBP23.28■■□□□ 1.32
CROCCP2-206ENST00000639594 IBTKQ9P2D0 1353 aaPredicted RBP23.28■■□□□ 1.32
CROCCP2-206ENST00000639594 KCNQ3O43525 872 aa23.27■■□□□ 1.32
CROCCP2-206ENST00000639594 GCP02774 474 aa23.26■■□□□ 1.31
CROCCP2-206ENST00000639594 UBTFL1P0CB47 393 aaPredicted RBP23.26■■□□□ 1.31
CROCCP2-206ENST00000639594 ZNF530Q6P9A1 599 aaPredicted RBP23.26■■□□□ 1.31
CROCCP2-206ENST00000639594 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
CROCCP2-206ENST00000639594 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
CROCCP2-206ENST00000639594 RGPD5Q99666 1765 aa23.26■■□□□ 1.31
CROCCP2-206ENST00000639594 ERC2O15083 957 aa23.25■■□□□ 1.31
CROCCP2-206ENST00000639594 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
CROCCP2-206ENST00000639594 SLIT3O75094 1523 aa23.25■■□□□ 1.31
CROCCP2-206ENST00000639594 REC8O95072 547 aa23.25■■□□□ 1.31
CROCCP2-206ENST00000639594 MX1P20591 662 aa23.24■■□□□ 1.31
CROCCP2-206ENST00000639594 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
CROCCP2-206ENST00000639594 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
CROCCP2-206ENST00000639594 ARHGEF25Q86VW2 580 aa23.24■■□□□ 1.31
CROCCP2-206ENST00000639594 L1TD1Q5T7N2 865 aaKnown RBP23.24■■□□□ 1.31
CROCCP2-206ENST00000639594 CHPF2Q9P2E5 772 aa23.24■■□□□ 1.31
CROCCP2-206ENST00000639594 TEFQ10587 303 aa23.23■■□□□ 1.31
CROCCP2-206ENST00000639594 BTBD11A6QL63 1104 aa23.23■■□□□ 1.31
CROCCP2-206ENST00000639594 HOXB7P09629 217 aa23.23■■□□□ 1.31
CROCCP2-206ENST00000639594 LMOD2Q6P5Q4 547 aa23.23■■□□□ 1.31
CROCCP2-206ENST00000639594 GBP4Q96PP9 640 aa23.23■■□□□ 1.31
CROCCP2-206ENST00000639594 SRCIN1Q9C0H9 1055 aa23.23■■□□□ 1.31
CROCCP2-206ENST00000639594 PXDNQ92626 1479 aa23.22■■□□□ 1.31
CROCCP2-206ENST00000639594 SSH3Q8TE77 659 aa23.21■■□□□ 1.31
CROCCP2-206ENST00000639594 ALS2Q96Q42 1657 aa23.21■■□□□ 1.31
CROCCP2-206ENST00000639594 NCAPD2Q15021 1401 aa23.21■■□□□ 1.31
CROCCP2-206ENST00000639594 SSFA2P28290 1259 aa23.21■■□□□ 1.31
CROCCP2-206ENST00000639594 FSD2A1L4K1 749 aa23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 STAP2Q9UGK3 403 aa23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 ANXA1P04083 346 aa23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 AMOTQ4VCS5 1084 aa23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 ANKRD24Q8TF21 1146 aa23.2■■□□□ 1.3
CROCCP2-206ENST00000639594 GOLGA6L3A6NEY3 463 aa23.19■■□□□ 1.3
CROCCP2-206ENST00000639594 ARXQ96QS3 562 aa23.19■■□□□ 1.3
CROCCP2-206ENST00000639594 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms