RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 G2E3Q7L622 706 aa13.27□□□□□ -0.28
SPIN3-216ENST00000638940 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.28
SPIN3-216ENST00000638940 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
SPIN3-216ENST00000638940 HMMRO75330 724 aa13.27□□□□□ -0.29
SPIN3-216ENST00000638940 FLIIQ13045 1269 aa13.27□□□□□ -0.29
SPIN3-216ENST00000638940 IL27Q8NEV9 243 aa13.27□□□□□ -0.29
SPIN3-216ENST00000638940 COL18A1P39060 1754 aa13.27□□□□□ -0.29
SPIN3-216ENST00000638940 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
SPIN3-216ENST00000638940 ATF3P18847 181 aa13.26□□□□□ -0.29
SPIN3-216ENST00000638940 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
SPIN3-216ENST00000638940 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
SPIN3-216ENST00000638940 C22orf23Q9BZE7 217 aa13.26□□□□□ -0.29
SPIN3-216ENST00000638940 MEIS3Q99687 375 aa13.26□□□□□ -0.29
SPIN3-216ENST00000638940 GNAI3P08754 354 aa13.25□□□□□ -0.29
SPIN3-216ENST00000638940 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
SPIN3-216ENST00000638940 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
SPIN3-216ENST00000638940 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
SPIN3-216ENST00000638940 ZNF530Q6P9A1 599 aaPredicted RBP13.24□□□□□ -0.29
SPIN3-216ENST00000638940 GNAI2P04899 355 aa13.24□□□□□ -0.29
SPIN3-216ENST00000638940 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
SPIN3-216ENST00000638940 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
SPIN3-216ENST00000638940 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
SPIN3-216ENST00000638940 NPHP3Q7Z494 1330 aa13.23□□□□□ -0.29
SPIN3-216ENST00000638940 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
SPIN3-216ENST00000638940 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
SPIN3-216ENST00000638940 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
SPIN3-216ENST00000638940 HEG1Q9ULI3 1381 aa13.23□□□□□ -0.29
SPIN3-216ENST00000638940 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
SPIN3-216ENST00000638940 PXDNQ92626 1479 aa13.23□□□□□ -0.29
SPIN3-216ENST00000638940 ERBB3P21860 1342 aa13.22□□□□□ -0.29
SPIN3-216ENST00000638940 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
SPIN3-216ENST00000638940 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-216ENST00000638940 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-216ENST00000638940 HDGFL1Q5TGJ6 251 aa13.22□□□□□ -0.29
SPIN3-216ENST00000638940 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
SPIN3-216ENST00000638940 TEFQ10587 303 aa13.22□□□□□ -0.29
SPIN3-216ENST00000638940 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
SPIN3-216ENST00000638940 F6X3S4 739 aa13.21□□□□□ -0.29
SPIN3-216ENST00000638940 CDC45O75419 566 aa13.21□□□□□ -0.29
SPIN3-216ENST00000638940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■□□□□ 10.8
SPIN3-216ENST00000638940 TTC22Q5TAA0 569 aa13.21□□□□□ -0.29
SPIN3-216ENST00000638940 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
SPIN3-216ENST00000638940 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
SPIN3-216ENST00000638940 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 CPDO75976 1380 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 LMOD2Q6P5Q4 547 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 SNX21Q969T3 373 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 PODXL2Q9NZ53 605 aa13.2□□□□□ -0.3
SPIN3-216ENST00000638940 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
SPIN3-216ENST00000638940 TBC1D9Q6ZT07 1266 aa13.19□□□□□ -0.3
SPIN3-216ENST00000638940 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
SPIN3-216ENST00000638940 IBTKQ9P2D0 1353 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-216ENST00000638940 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
SPIN3-216ENST00000638940 GSPT1P15170 499 aaKnown RBP13.18□□□□□ -0.3
SPIN3-216ENST00000638940 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
SPIN3-216ENST00000638940 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
SPIN3-216ENST00000638940 ANTXR1Q9H6X2 564 aa13.18□□□□□ -0.3
SPIN3-216ENST00000638940 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
SPIN3-216ENST00000638940 MRC1P22897 1456 aa13.17□□□□□ -0.3
SPIN3-216ENST00000638940 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
SPIN3-216ENST00000638940 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-216ENST00000638940 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
SPIN3-216ENST00000638940 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
SPIN3-216ENST00000638940 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
SPIN3-216ENST00000638940 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-216ENST00000638940 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-216ENST00000638940 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
SPIN3-216ENST00000638940 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
SPIN3-216ENST00000638940 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
SPIN3-216ENST00000638940 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-216ENST00000638940 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
SPIN3-216ENST00000638940 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
SPIN3-216ENST00000638940 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.3
SPIN3-216ENST00000638940 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
SPIN3-216ENST00000638940 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
SPIN3-216ENST00000638940 KCNQ3O43525 872 aa13.15□□□□□ -0.31
SPIN3-216ENST00000638940 BEND3Q5T5X7 828 aa13.15□□□□□ -0.31
SPIN3-216ENST00000638940 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.31
SPIN3-216ENST00000638940 AOX1Q06278 1338 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 POLA2Q14181 598 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
SPIN3-216ENST00000638940 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
SPIN3-216ENST00000638940 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
SPIN3-216ENST00000638940 HYPKQ9NX55 129 aa13.13□□□□□ -0.31
SPIN3-216ENST00000638940 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
SPIN3-216ENST00000638940 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
SPIN3-216ENST00000638940 ADCY9O60503 1353 aa13.13□□□□□ -0.31
SPIN3-216ENST00000638940 MEGF6O75095 1541 aa13.13□□□□□ -0.31
SPIN3-216ENST00000638940 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
SPIN3-216ENST00000638940 PHKG2P15735 406 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms