RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
SCARB2-214ENST00000638843 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
SCARB2-214ENST00000638843 CCNL1Q9UK58 526 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-214ENST00000638843 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
SCARB2-214ENST00000638843 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
SCARB2-214ENST00000638843 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
SCARB2-214ENST00000638843 MTHFSDQ2M296 383 aaKnown RBP12.79□□□□□ -0.36
SCARB2-214ENST00000638843 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
SCARB2-214ENST00000638843 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
SCARB2-214ENST00000638843 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-214ENST00000638843 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
SCARB2-214ENST00000638843 BTAF1O14981 1849 aa12.78□□□□□ -0.36
SCARB2-214ENST00000638843 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-214ENST00000638843 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
SCARB2-214ENST00000638843 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
SCARB2-214ENST00000638843 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.36
SCARB2-214ENST00000638843 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-214ENST00000638843 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-214ENST00000638843 CABP4P57796 275 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCARB2-214ENST00000638843 RALBP1Q15311 655 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 PHACTR3Q96KR7 559 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 LGR6Q9HBX8 967 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
SCARB2-214ENST00000638843 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
SCARB2-214ENST00000638843 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
SCARB2-214ENST00000638843 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
SCARB2-214ENST00000638843 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
SCARB2-214ENST00000638843 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
SCARB2-214ENST00000638843 SIK1P57059 783 aa12.75□□□□□ -0.37
SCARB2-214ENST00000638843 TFCP2L1Q9NZI6 479 aa12.75□□□□□ -0.37
SCARB2-214ENST00000638843 PAPPAQ13219 1627 aa12.74□□□□□ -0.37
SCARB2-214ENST00000638843 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
SCARB2-214ENST00000638843 FCHSD2O94868 740 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 PNPLA7Q6ZV29 1317 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 ITPK1Q13572 414 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
SCARB2-214ENST00000638843 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-214ENST00000638843 ATP6V1AP38606 617 aa12.72□□□□□ -0.37
SCARB2-214ENST00000638843 PTGER2P43116 358 aa12.72□□□□□ -0.37
SCARB2-214ENST00000638843 LINC00116Q8NCU8 138 aa12.72□□□□□ -0.37
SCARB2-214ENST00000638843 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
SCARB2-214ENST00000638843 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-214ENST00000638843 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
SCARB2-214ENST00000638843 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.37
SCARB2-214ENST00000638843 AMIGO3Q86WK7 504 aa12.71□□□□□ -0.37
SCARB2-214ENST00000638843 PRKRIP1Q9H875 184 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-214ENST00000638843 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.38
SCARB2-214ENST00000638843 UTRNP46939 3433 aa12.7□□□□□ -0.38
SCARB2-214ENST00000638843 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
SCARB2-214ENST00000638843 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
SCARB2-214ENST00000638843 SMIM5Q71RC9 77 aa12.7□□□□□ -0.38
SCARB2-214ENST00000638843 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
SCARB2-214ENST00000638843 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
SCARB2-214ENST00000638843 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
SCARB2-214ENST00000638843 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-214ENST00000638843 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
SCARB2-214ENST00000638843 AK7Q96M32 723 aa12.69□□□□□ -0.38
SCARB2-214ENST00000638843 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
SCARB2-214ENST00000638843 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
SCARB2-214ENST00000638843 LY75O60449 1722 aa12.68□□□□□ -0.38
SCARB2-214ENST00000638843 LRP5O75197 1615 aa12.68□□□□□ -0.38
SCARB2-214ENST00000638843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
SCARB2-214ENST00000638843 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-214ENST00000638843 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
SCARB2-214ENST00000638843 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-214ENST00000638843 ITGB4P16144 1822 aa12.67□□□□□ -0.38
SCARB2-214ENST00000638843 CASZ1Q86V15 1759 aa12.66□□□□□ -0.38
SCARB2-214ENST00000638843 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
SCARB2-214ENST00000638843 GNPATO15228 680 aa12.66□□□□□ -0.38
SCARB2-214ENST00000638843 PHF14O94880 888 aa12.66□□□□□ -0.38
SCARB2-214ENST00000638843 TEFQ10587 303 aa12.66□□□□□ -0.38
SCARB2-214ENST00000638843 MCM10Q7L590 875 aa12.66□□□□□ -0.38
SCARB2-214ENST00000638843 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
SCARB2-214ENST00000638843 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
SCARB2-214ENST00000638843 MRC1P22897 1456 aa12.65□□□□□ -0.38
SCARB2-214ENST00000638843 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
SCARB2-214ENST00000638843 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
SCARB2-214ENST00000638843 SSFA2P28290 1259 aa12.64□□□□□ -0.39
SCARB2-214ENST00000638843 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
SCARB2-214ENST00000638843 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
SCARB2-214ENST00000638843 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
SCARB2-214ENST00000638843 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
SCARB2-214ENST00000638843 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
SCARB2-214ENST00000638843 KCNQ3O43525 872 aa12.63□□□□□ -0.39
SCARB2-214ENST00000638843 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
SCARB2-214ENST00000638843 NEFMP07197 916 aa12.63□□□□□ -0.39
SCARB2-214ENST00000638843 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
SCARB2-214ENST00000638843 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
SCARB2-214ENST00000638843 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-214ENST00000638843 ARXQ96QS3 562 aa12.63□□□□□ -0.39
SCARB2-214ENST00000638843 CNTNAP4Q9C0A0 1308 aa12.63□□□□□ -0.39
SCARB2-214ENST00000638843 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
SCARB2-214ENST00000638843 GABBR2O75899 941 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms