RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
NECAP1-212ENST00000638787 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
NECAP1-212ENST00000638787 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
NECAP1-212ENST00000638787 CEMIPQ8WUJ3 1361 aa11.73□□□□□ -0.53
NECAP1-212ENST00000638787 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
NECAP1-212ENST00000638787 PNISRQ8TF01 805 aaKnown RBP11.72□□□□□ -0.53
NECAP1-212ENST00000638787 RTF1Q92541 710 aaKnown RBP11.72□□□□□ -0.53
NECAP1-212ENST00000638787 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
NECAP1-212ENST00000638787 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
NECAP1-212ENST00000638787 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
NECAP1-212ENST00000638787 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-212ENST00000638787 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
NECAP1-212ENST00000638787 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
NECAP1-212ENST00000638787 MCM10Q7L590 875 aa11.72□□□□□ -0.53
NECAP1-212ENST00000638787 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-212ENST00000638787 KCNQ4P56696 695 aa11.71□□□□□ -0.53
NECAP1-212ENST00000638787 TEFQ10587 303 aa11.71□□□□□ -0.53
NECAP1-212ENST00000638787 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.54
NECAP1-212ENST00000638787 DCTN1Q14203 1278 aa11.71□□□□□ -0.54
NECAP1-212ENST00000638787 NBPF14Q5TI25 921 aa11.71□□□□□ -0.54
NECAP1-212ENST00000638787 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.54
NECAP1-212ENST00000638787 TAF1LQ8IZX4 1826 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 LOC102724428A0A0B4J2F2 783 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 SIK1P57059 783 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 RIPK4P57078 832 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
NECAP1-212ENST00000638787 C5P01031 1676 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 SLC39A6Q13433 755 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
NECAP1-212ENST00000638787 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
NECAP1-212ENST00000638787 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
NECAP1-212ENST00000638787 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
NECAP1-212ENST00000638787 R3HDM1Q15032 1099 aaKnown RBP11.68□□□□□ -0.54
NECAP1-212ENST00000638787 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
NECAP1-212ENST00000638787 LMOD3Q0VAK6 560 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 UBR2Q8IWV8 1755 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 SLC15A2Q16348 729 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 SLC4A9Q96Q91 983 aa11.67□□□□□ -0.54
NECAP1-212ENST00000638787 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
NECAP1-212ENST00000638787 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 CCER2I3L3R5 266 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 APAF1O14727 1248 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 ITPK1Q13572 414 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 TTC5Q8N0Z6 440 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 CICQ96RK0 1608 aaPredicted RBP11.66□□□□□ -0.54
NECAP1-212ENST00000638787 HMGB2P26583 209 aaKnown RBP11.66□□□□□ -0.54
NECAP1-212ENST00000638787 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
NECAP1-212ENST00000638787 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
NECAP1-212ENST00000638787 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.54
NECAP1-212ENST00000638787 TJP1Q07157 1748 aa11.65□□□□□ -0.54
NECAP1-212ENST00000638787 LINC00116Q8NCU8 138 aa11.65□□□□□ -0.54
NECAP1-212ENST00000638787 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
NECAP1-212ENST00000638787 COL5A3P25940 1745 aaPredicted RBP11.65□□□□□ -0.54
NECAP1-212ENST00000638787 MIER1Q8N108 512 aa11.64□□□□□ -0.55
NECAP1-212ENST00000638787 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
NECAP1-212ENST00000638787 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 KCNQ3O43525 872 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 ZNF496Q96IT1 587 aaPredicted RBP11.63□□□□□ -0.55
NECAP1-212ENST00000638787 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 CASZ1Q86V15 1759 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 AK7Q96M32 723 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 FMNL2Q96PY5 1086 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 MIS18AQ9NYP9 233 aa11.63□□□□□ -0.55
NECAP1-212ENST00000638787 UBR3Q6ZT12 1888 aa11.62□□□□□ -0.55
NECAP1-212ENST00000638787 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
NECAP1-212ENST00000638787 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
NECAP1-212ENST00000638787 PNPLA7Q6ZV29 1317 aa11.62□□□□□ -0.55
NECAP1-212ENST00000638787 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
NECAP1-212ENST00000638787 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
NECAP1-212ENST00000638787 PDGFDQ9GZP0 370 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-212ENST00000638787 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
NECAP1-212ENST00000638787 GNPATO15228 680 aa11.6□□□□□ -0.55
NECAP1-212ENST00000638787 CRKLP46109 303 aaKnown RBP11.6□□□□□ -0.55
NECAP1-212ENST00000638787 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
NECAP1-212ENST00000638787 TSPYL4Q9UJ04 414 aa11.6□□□□□ -0.55
NECAP1-212ENST00000638787 CYP19A1P11511 503 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-212ENST00000638787 AMIGO3Q86WK7 504 aa11.59□□□□□ -0.55
NECAP1-212ENST00000638787 BABAM1Q9NWV8 329 aa11.59□□□□□ -0.55
NECAP1-212ENST00000638787 SSFA2P28290 1259 aa11.59□□□□□ -0.55
NECAP1-212ENST00000638787 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
NECAP1-212ENST00000638787 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
NECAP1-212ENST00000638787 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
NECAP1-212ENST00000638787 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-212ENST00000638787 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
NECAP1-212ENST00000638787 PHF14O94880 888 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 CCDC87Q9NVE4 849 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms