RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 DBF4Q9UBU7 674 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 MAP3K5Q99683 1374 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 SMARCA5O60264 1052 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 DIP2CQ9Y2E4 1556 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 ATP6V1AP38606 617 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 MTMR7Q9Y216 660 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 ADGRB3O60242 1522 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 SLC39A6Q13433 755 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 SAMD1Q6SPF0 538 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 DNAAF4Q8WXU2 420 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 IL1RAPL2Q9NP60 686 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 SNRPA1P09661 255 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 EYA1Q99502 592 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 TEX13AQ9BXU3 409 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 GPTP24298 496 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 HMGB2P26583 209 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 PSMA5P28066 241 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 RALYLQ86SE5 291 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 ZBTB3Q9H5J0 574 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 CHPF2Q9P2E5 772 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 RIMS1Q86UR5 1692 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 DCAF8L1A6NGE4 600 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 DDB1Q16531 1140 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 RSPH6AQ9H0K4 717 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 TRMT112Q9UI30 125 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 PIK3R4Q99570 1358 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 CPLX1O14810 134 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 RBM5P52756 815 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 TPM4P67936 248 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 HSP90AB3PQ58FF7 597 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 METTL24Q5JXM2 366 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 KIDINS220Q9ULH0 1771 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 SPATA31E1Q6ZUB1 1445 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 SBNO1A3KN83 1393 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 FLIIQ13045 1269 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 LRRFIP2Q9Y608 721 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 ALKQ9UM73 1620 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 RAB11FIP3O75154 756 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 NCBP3Q53F19 620 aaKnown RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 MAP3K19Q56UN5 1328 aa5.27□□□□□ -1.57
SCN3A-208ENST00000638473 RPAP2Q8IXW5 612 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-208ENST00000638473 PLA2R1Q13018 1463 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 PCDH11XQ9BZA7 1347 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 PCDH11YQ9BZA8 1340 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 RFC4P35249 363 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 RRP12Q5JTH9 1297 aaKnown RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 SLAIN2Q9P270 581 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 DIP2BQ9P265 1576 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 ATP5J2-PTCD1G3V325 749 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 TRIM27P14373 513 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 CPLX2Q6PUV4 134 aaKnown RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 CREBRFQ8IUR6 639 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 NFATC2IPQ8NCF5 419 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 EXOC6BQ9Y2D4 811 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 PIP4K2AP48426 406 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 SMC3Q9UQE7 1217 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 RNMTO43148 476 aaKnown RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 SLC3A2P08195 630 aaKnown RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 JARID2Q92833 1246 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 RPGRQ92834 1020 aaKnown RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 CWC25Q9NXE8 425 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-208ENST00000638473 MADDQ8WXG6 1647 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 DDX11L8A8MPP1 907 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 ZSCAN25Q6NSZ9 544 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 DNAJC5Q9H3Z4 198 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 IL13P35225 146 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 SIRT1Q96EB6 747 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 ANKIB1Q9P2G1 1089 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 CEP126Q9P2H0 1117 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 ARHGEF10O15013 1369 aa5.26□□□□□ -1.57
SCN3A-208ENST00000638473 ANXA1P04083 346 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 CWC27Q6UX04 472 aaKnown RBP5.25□□□□□ -1.57
SCN3A-208ENST00000638473 LAMC1P11047 1609 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 ZMYM4Q5VZL5 1548 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 A0A087WZG4 1122 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 C8orf58Q8NAV2 365 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 AKAP2Q9Y2D5 859 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 FAM135BQ49AJ0 1406 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 PER1O15534 1290 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-208ENST00000638473 CWC22Q9HCG8 908 aaKnown RBP5.25□□□□□ -1.57
SCN3A-208ENST00000638473 ANKRD18BA2A2Z9 1011 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 IFIT5Q13325 482 aaKnown RBP5.25□□□□□ -1.57
SCN3A-208ENST00000638473 MRPL50Q8N5N7 158 aaKnown RBP5.25□□□□□ -1.57
SCN3A-208ENST00000638473 KIF1BPQ96EK5 621 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 CCDC34Q96HJ3 373 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 ROBO2Q9HCK4 1378 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 NRDCO43847 1150 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 PHACTR3Q96KR7 559 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 PIK3C2BO00750 1634 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 FER1L4A9Z1Z3 1794 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 RAI14Q9P0K7 980 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 ATP6V1DQ9Y5K8 247 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 A2ML1A8K2U0 1454 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 PREX1Q8TCU6 1659 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 CDC42BPGQ6DT37 1551 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 PI4KAP2A4QPH2 592 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 PI4KAP1Q8N8J0 262 aa5.25□□□□□ -1.57
SCN3A-208ENST00000638473 CAVIN4Q5BKX8 364 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms