RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 TRIM29Q14134 588 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 DCCP43146 1447 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 RALYLQ86SE5 291 aaKnown RBP8.08□□□□□ -1.12
SCARB2-207ENST00000638295 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCARB2-207ENST00000638295 TMOD2Q9NZR1 351 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 SLC4A2P04920 1241 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 ZSCAN25Q6NSZ9 544 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 TPTE2Q6XPS3 522 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 FAM184AQ8NB25 1140 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 PSDA5PKW4 1024 aaPredicted RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 DHX16O60231 1041 aaKnown RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 TPM4P67936 248 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 EN1Q05925 392 aaPredicted RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 WWC3Q9ULE0 1092 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 ATF5Q9Y2D1 282 aaPredicted RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 RICTORQ6R327 1708 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 DDX46Q7L014 1031 aaKnown RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 ARHGEF25Q86VW2 580 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 CPLX1O14810 134 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 EXOSC9Q06265 439 aaKnown RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 SART3Q15020 963 aaKnown RBP8.07□□□□□ -1.12
SCARB2-207ENST00000638295 WASHC4Q2M389 1173 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 NYXQ9GZU5 481 aa8.07□□□□□ -1.12
SCARB2-207ENST00000638295 PLIN1O60240 522 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-207ENST00000638295 CEP126Q9P2H0 1117 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 SF3A1Q15459 793 aaKnown RBP8.06□□□□□ -1.12
SCARB2-207ENST00000638295 BEGAINQ9BUH8 593 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 GCC2Q8IWJ2 1684 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 RAD21O60216 631 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
SCARB2-207ENST00000638295 TRMT112Q9UI30 125 aaKnown RBP8.06□□□□□ -1.12
SCARB2-207ENST00000638295 SOS2Q07890 1332 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-207ENST00000638295 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 BCS1LQ9Y276 419 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 A0A1W2PP64 1363 aa8.06□□□□□ -1.12
SCARB2-207ENST00000638295 MYOM2P54296 1465 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 CEP152O94986 1710 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 H0YIN7 160 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 CNTROBQ8N137 903 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 NACAP1Q9BZK3 213 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 RNF17Q9BXT8 1623 aaKnown RBP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 KIAA2012Q0VF49 1180 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 EIF4A2Q14240 407 aaKnown RBP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 INTS3Q68E01 1043 aaKnown RBP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 DPY19L2Q6NUT2 758 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 EYA1Q99502 592 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 SPATA31D1Q6ZQQ2 1576 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 PREX1Q8TCU6 1659 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 H3BQV1 296 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 TMPOP42166 694 aaKnown RBP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 RBM5P52756 815 aaKnown RBP eCLIP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 RALGAPBQ86X10 1494 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 CCDC47Q96A33 483 aaKnown RBP8.05□□□□□ -1.12
SCARB2-207ENST00000638295 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 HYPKQ9NX55 129 aa8.05□□□□□ -1.12
SCARB2-207ENST00000638295 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 XBP1P17861 261 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 ANKIB1Q9P2G1 1089 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 FBLN1P23142 703 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 TTC39AQ5SRH9 613 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 NFXL1Q6ZNB6 911 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 MCM10Q7L590 875 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 SPATA31E1Q6ZUB1 1445 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 PLCB2Q00722 1185 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 NBR1Q14596 966 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCARB2-207ENST00000638295 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 GCC1Q96CN9 775 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
SCARB2-207ENST00000638295 DBF4Q9UBU7 674 aaPredicted RBP8.04□□□□□ -1.12
SCARB2-207ENST00000638295 ERVV-2B6SEH9 535 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 CNBD1Q8NA66 436 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 AKAP2Q9Y2D5 859 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 GPTP24298 496 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 DZIP3Q86Y13 1208 aaKnown RBP8.03□□□□□ -1.12
SCARB2-207ENST00000638295 CRBNQ96SW2 442 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCARB2-207ENST00000638295 IQGAP3Q86VI3 1631 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 IFIT1P09914 478 aaKnown RBP8.03□□□□□ -1.12
SCARB2-207ENST00000638295 PSMA5P28066 241 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 SLF2Q8IX21 1173 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 FSD1Q9BTV5 496 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 PIK3C2BO00750 1634 aa8.03□□□□□ -1.12
SCARB2-207ENST00000638295 CCDC43Q96MW1 224 aaKnown RBP8.02□□□□□ -1.12
SCARB2-207ENST00000638295 CDC5LQ99459 802 aaKnown RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms