RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 HSP90AA2PQ14568 343 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
SMARCA2-265ENST00000638139 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
SMARCA2-265ENST00000638139 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
SMARCA2-265ENST00000638139 TPM2P07951 284 aa12.28□□□□□ -0.44
SMARCA2-265ENST00000638139 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
SMARCA2-265ENST00000638139 PALD1Q9ULE6 856 aa12.28□□□□□ -0.44
SMARCA2-265ENST00000638139 OFD1O75665 1012 aa12.27□□□□□ -0.44
SMARCA2-265ENST00000638139 HS1BP3Q53T59 392 aa12.27□□□□□ -0.44
SMARCA2-265ENST00000638139 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 SSH2Q76I76 1423 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 ADAMTS13Q76LX8 1427 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 MX1P20591 662 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 MCM2P49736 904 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 CUL4AQ13619 759 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 KIAA1211Q6ZU35 1233 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
SMARCA2-265ENST00000638139 BRD1O95696 1058 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 CHMLP26374 656 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 ATP8B2P98198 1209 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 KDRP35968 1356 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 SYCE3A1L190 88 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 MCCP23508 829 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
SMARCA2-265ENST00000638139 GNAI3P08754 354 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 FLIIQ13045 1269 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 RILPL2Q969X0 211 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 ANAPC15P60006 121 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 EYA1Q99502 592 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 NOL7Q9UMY1 257 aaKnown RBP12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 FLT4P35916 1363 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 TNRQ92752 1358 aa12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 N4BP2Q86UW6 1770 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-265ENST00000638139 MBD3O95983 291 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 NOL8Q76FK4 1167 aaKnown RBP12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 STAP2Q9UGK3 403 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 IL17RAQ96F46 866 aa12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
SMARCA2-265ENST00000638139 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
SMARCA2-265ENST00000638139 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
SMARCA2-265ENST00000638139 SRCIN1Q9C0H9 1055 aa12.23□□□□□ -0.45
SMARCA2-265ENST00000638139 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 AMPHP49418 695 aa12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 UPF3BQ9BZI7 483 aaKnown RBP12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 TCHHQ07283 1943 aa12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 RGPD8O14715 1765 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 IL25Q9H293 177 aa12.22□□□□□ -0.45
SMARCA2-265ENST00000638139 PTPRUQ92729 1446 aa12.21□□□□□ -0.45
SMARCA2-265ENST00000638139 LTKP29376 864 aa12.21□□□□□ -0.45
SMARCA2-265ENST00000638139 USP44Q9H0E7 712 aa12.21□□□□□ -0.45
SMARCA2-265ENST00000638139 AOX1Q06278 1338 aa12.21□□□□□ -0.45
SMARCA2-265ENST00000638139 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.46
SMARCA2-265ENST00000638139 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.46
SMARCA2-265ENST00000638139 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 TERF1P54274 439 aa12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 IL1RAPL2Q9NP60 686 aa12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 PIK3C2AO00443 1686 aa12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 PXDNLA1KZ92 1463 aa12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
SMARCA2-265ENST00000638139 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 HSPA4P34932 840 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 SSH3Q8TE77 659 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 CCDC39Q9UFE4 941 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 R3HCC1Q9Y3T6 440 aaKnown RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 GADD45BO75293 160 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 FOXD4L6Q3SYB3 417 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 FOXD4L3Q6VB84 417 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-265ENST00000638139 EPB41L2O43491 1005 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms