RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 SSH2Q76I76 1423 aa10.88□□□□□ -0.67
CACNA1A-254ENST00000637952 IL17REQ8NFR9 667 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 SPATA31A5Q5VU36 1347 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 SPATA31A7Q8IWB4 1347 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 CHMP4BQ9H444 224 aaKnown RBP10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 SETD1AO15047 1707 aaKnown RBP10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 SNRPA1P09661 255 aaKnown RBP10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 ZNF428Q96B54 188 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 SLC52A2Q9HAB3 445 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 ROBO1Q9Y6N7 1651 aa10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-254ENST00000637952 PXDNQ92626 1479 aa10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 CYP27B1O15528 508 aa10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 FNBP4Q8N3X1 1017 aaPredicted RBP10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 HMGB2P26583 209 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 FANCIQ9NVI1 1328 aa10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 AK7Q96M32 723 aa10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 TEX13AQ9BXU3 409 aaPredicted RBP10.86□□□□□ -0.67
CACNA1A-254ENST00000637952 ERVV-2B6SEH9 535 aa10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 ZNF790Q6PG37 636 aa10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 PLEKHF1Q96S99 279 aa10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 PHF14O94880 888 aa10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 CCDC27Q2M243 656 aa10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 C9orf78Q9NZ63 289 aaPredicted RBP10.85□□□□□ -0.67
CACNA1A-254ENST00000637952 KRT24Q2M2I5 525 aa10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 ANXA1P04083 346 aa10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 BAG6P46379 1132 aa10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 PIP4K2AP48426 406 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 PPP1R1BQ9UD71 204 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
CACNA1A-254ENST00000637952 PHLPP1O60346 1717 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 BCAR3O75815 825 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 RTL5Q5HYW3 569 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 ZPR1O75312 459 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 ASAP1Q9ULH1 1129 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 IL16Q14005 1332 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 C8orf58Q8NAV2 365 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 KIF16BQ96L93 1317 aa10.83□□□□□ -0.68
CACNA1A-254ENST00000637952 STRCP1A6NGW2 1772 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 DBF4Q9UBU7 674 aaPredicted RBP10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 KCNQ3O43525 872 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 KCNQ2O43526 872 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 MARCH10Q8NA82 808 aaPredicted RBP10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
CACNA1A-254ENST00000637952 KCNQ4P56696 695 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 NBPF14Q5TI25 921 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 DZIP1LQ8IYY4 767 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 NOB1Q9ULX3 412 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 DNAJC10Q8IXB1 793 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 PIGBQ92521 554 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 APBB1O00213 710 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 CT47B1P0C2W7 299 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 RFC4P35249 363 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 SSH1Q8WYL5 1049 aa10.81□□□□□ -0.68
CACNA1A-254ENST00000637952 USP32Q8NFA0 1604 aa10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 CHL1O00533 1208 aa10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 TSPYL6Q8N831 410 aa10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 TMX4Q9H1E5 349 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 ZBTB3Q9H5J0 574 aa10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 DEKP35659 375 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-254ENST00000637952 RTCBQ9Y3I0 505 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 COL5A2P05997 1499 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 GNPATO15228 680 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 HYPKQ9NX55 129 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 CHPF2Q9P2E5 772 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 A1BGP04217 495 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 RRP1P56182 461 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 SIK1P57059 783 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
CACNA1A-254ENST00000637952 MAP2P11137 1827 aaKnown RBP10.78□□□□□ -0.68
CACNA1A-254ENST00000637952 POTEAQ6S8J7 498 aa10.78□□□□□ -0.68
CACNA1A-254ENST00000637952 COPS6Q7L5N1 327 aa10.78□□□□□ -0.68
CACNA1A-254ENST00000637952 ZNF652Q9Y2D9 606 aa10.78□□□□□ -0.68
CACNA1A-254ENST00000637952 CHRM1P11229 460 aaPredicted RBP10.78□□□□□ -0.68
CACNA1A-254ENST00000637952 STK32BQ9NY57 414 aa10.78□□□□□ -0.68
CACNA1A-254ENST00000637952 RARSP54136 660 aaKnown RBP10.77□□□□□ -0.68
CACNA1A-254ENST00000637952 EIF4A1P60842 406 aaKnown RBP10.77□□□□□ -0.68
CACNA1A-254ENST00000637952 BABAM1Q9NWV8 329 aa10.77□□□□□ -0.68
CACNA1A-254ENST00000637952 USP16Q9Y5T5 823 aa10.77□□□□□ -0.68
CACNA1A-254ENST00000637952 MYOM1P52179 1685 aa10.77□□□□□ -0.68
CACNA1A-254ENST00000637952 CAMTA1Q9Y6Y1 1673 aa10.77□□□□□ -0.68
CACNA1A-254ENST00000637952 F6X3S4 739 aa10.77□□□□□ -0.69
CACNA1A-254ENST00000637952 GPTP24298 496 aa10.77□□□□□ -0.69
CACNA1A-254ENST00000637952 XAGE3Q8WTP9 111 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms