RNA–Protein interactions for RNA: ENST00000637917.1

MECP2-224, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-224ENST00000637917 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
MECP2-224ENST00000637917 SLC27A3Q5K4L6 730 aa12.33□□□□□ -0.44
MECP2-224ENST00000637917 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
MECP2-224ENST00000637917 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
MECP2-224ENST00000637917 ATG3Q9NT62 314 aa12.33□□□□□ -0.44
MECP2-224ENST00000637917 RREB1Q92766 1687 aa12.32□□□□□ -0.44
MECP2-224ENST00000637917 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
MECP2-224ENST00000637917 DCTN1Q14203 1278 aa12.32□□□□□ -0.44
MECP2-224ENST00000637917 FAM9BQ8IZU0 186 aa12.32□□□□□ -0.44
MECP2-224ENST00000637917 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
MECP2-224ENST00000637917 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
MECP2-224ENST00000637917 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
MECP2-224ENST00000637917 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
MECP2-224ENST00000637917 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
MECP2-224ENST00000637917 PSDA5PKW4 1024 aaPredicted RBP12.31□□□□□ -0.44
MECP2-224ENST00000637917 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
MECP2-224ENST00000637917 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
MECP2-224ENST00000637917 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
MECP2-224ENST00000637917 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
MECP2-224ENST00000637917 R3HDM1Q15032 1099 aaKnown RBP12.31□□□□□ -0.44
MECP2-224ENST00000637917 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
MECP2-224ENST00000637917 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
MECP2-224ENST00000637917 ATP6V1AP38606 617 aa12.3□□□□□ -0.44
MECP2-224ENST00000637917 SIK1P57059 783 aa12.3□□□□□ -0.44
MECP2-224ENST00000637917 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
MECP2-224ENST00000637917 TTC5Q8N0Z6 440 aa12.3□□□□□ -0.44
MECP2-224ENST00000637917 LY75O60449 1722 aa12.3□□□□□ -0.44
MECP2-224ENST00000637917 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
MECP2-224ENST00000637917 APAF1O14727 1248 aa12.29□□□□□ -0.44
MECP2-224ENST00000637917 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
MECP2-224ENST00000637917 MRC1P22897 1456 aa12.28□□□□□ -0.44
MECP2-224ENST00000637917 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
MECP2-224ENST00000637917 SLC15A2Q16348 729 aa12.28□□□□□ -0.44
MECP2-224ENST00000637917 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
MECP2-224ENST00000637917 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
MECP2-224ENST00000637917 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
MECP2-224ENST00000637917 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.45
MECP2-224ENST00000637917 SENP3-EIF4A1A0A087X0R7 540 aa12.26□□□□□ -0.45
MECP2-224ENST00000637917 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
MECP2-224ENST00000637917 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
MECP2-224ENST00000637917 MIER1Q8N108 512 aa12.26□□□□□ -0.45
MECP2-224ENST00000637917 AK7Q96M32 723 aa12.26□□□□□ -0.45
MECP2-224ENST00000637917 MSH5O43196 834 aa12.25□□□□□ -0.45
MECP2-224ENST00000637917 ITPK1Q13572 414 aa12.25□□□□□ -0.45
MECP2-224ENST00000637917 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
MECP2-224ENST00000637917 MIS18AQ9NYP9 233 aa12.25□□□□□ -0.45
MECP2-224ENST00000637917 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
MECP2-224ENST00000637917 C5P01031 1676 aa12.25□□□□□ -0.45
MECP2-224ENST00000637917 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
MECP2-224ENST00000637917 TAF1LQ8IZX4 1826 aa12.25□□□□□ -0.45
MECP2-224ENST00000637917 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
MECP2-224ENST00000637917 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
MECP2-224ENST00000637917 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
MECP2-224ENST00000637917 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
MECP2-224ENST00000637917 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
MECP2-224ENST00000637917 PAPPAQ13219 1627 aa12.23□□□□□ -0.45
MECP2-224ENST00000637917 KCNQ3O43525 872 aa12.23□□□□□ -0.45
MECP2-224ENST00000637917 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
MECP2-224ENST00000637917 ZNF496Q96IT1 587 aaPredicted RBP12.23□□□□□ -0.45
MECP2-224ENST00000637917 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
MECP2-224ENST00000637917 GNPATO15228 680 aa12.22□□□□□ -0.45
MECP2-224ENST00000637917 PHF14O94880 888 aa12.22□□□□□ -0.45
MECP2-224ENST00000637917 CALD1Q05682 793 aaKnown RBP12.22□□□□□ -0.45
MECP2-224ENST00000637917 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
MECP2-224ENST00000637917 TSPYL4Q9UJ04 414 aa12.22□□□□□ -0.45
MECP2-224ENST00000637917 C4BP0C0L5 1744 aa12.22□□□□□ -0.45
MECP2-224ENST00000637917 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
MECP2-224ENST00000637917 STARD3NLO95772 234 aa12.21□□□□□ -0.45
MECP2-224ENST00000637917 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.45
MECP2-224ENST00000637917 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
MECP2-224ENST00000637917 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
MECP2-224ENST00000637917 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.46
MECP2-224ENST00000637917 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
MECP2-224ENST00000637917 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
MECP2-224ENST00000637917 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
MECP2-224ENST00000637917 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
MECP2-224ENST00000637917 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
MECP2-224ENST00000637917 CNTNAP4Q9C0A0 1308 aa12.19□□□□□ -0.46
MECP2-224ENST00000637917 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
MECP2-224ENST00000637917 SNRPA1P09661 255 aaKnown RBP12.19□□□□□ -0.46
MECP2-224ENST00000637917 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
MECP2-224ENST00000637917 PDGFDQ9GZP0 370 aaPredicted RBP12.19□□□□□ -0.46
MECP2-224ENST00000637917 CCDC87Q9NVE4 849 aa12.19□□□□□ -0.46
MECP2-224ENST00000637917 BABAM1Q9NWV8 329 aa12.19□□□□□ -0.46
MECP2-224ENST00000637917 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
MECP2-224ENST00000637917 TJP1Q07157 1748 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
MECP2-224ENST00000637917 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 SSFA2P28290 1259 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 EIF4A1P60842 406 aaKnown RBP12.18□□□□□ -0.46
MECP2-224ENST00000637917 GNAI1P63096 354 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
MECP2-224ENST00000637917 COL23A1Q86Y22 540 aaPredicted RBP12.18□□□□□ -0.46
MECP2-224ENST00000637917 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
MECP2-224ENST00000637917 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
MECP2-224ENST00000637917 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms