RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 AK7Q96M32 723 aa19.2■□□□□ 0.66
CACNA1A-249ENST00000637777 TAF1LQ8IZX4 1826 aa19.2■□□□□ 0.66
CACNA1A-249ENST00000637777 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
CACNA1A-249ENST00000637777 AKT1S1Q96B36 256 aa19.19■□□□□ 0.66
CACNA1A-249ENST00000637777 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
CACNA1A-249ENST00000637777 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
CACNA1A-249ENST00000637777 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-249ENST00000637777 MYBBP1AQ9BQG0 1328 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-249ENST00000637777 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-249ENST00000637777 RNMTO43148 476 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-249ENST00000637777 MAP3K5Q99683 1374 aa19.18■□□□□ 0.66
CACNA1A-249ENST00000637777 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
CACNA1A-249ENST00000637777 LGR6Q9HBX8 967 aa19.17■□□□□ 0.66
CACNA1A-249ENST00000637777 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
CACNA1A-249ENST00000637777 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-249ENST00000637777 FCHSD2O94868 740 aa19.16■□□□□ 0.66
CACNA1A-249ENST00000637777 TEFQ10587 303 aa19.16■□□□□ 0.66
CACNA1A-249ENST00000637777 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
CACNA1A-249ENST00000637777 QSER1Q2KHR3 1735 aa19.16■□□□□ 0.66
CACNA1A-249ENST00000637777 PHF14O94880 888 aa19.15■□□□□ 0.66
CACNA1A-249ENST00000637777 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-249ENST00000637777 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
CACNA1A-249ENST00000637777 MTFR1LQ9H019 292 aa19.15■□□□□ 0.66
CACNA1A-249ENST00000637777 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
CACNA1A-249ENST00000637777 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
CACNA1A-249ENST00000637777 LINC00116Q8NCU8 138 aa19.13■□□□□ 0.65
CACNA1A-249ENST00000637777 PNNQ9H307 717 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-249ENST00000637777 GNPATO15228 680 aa19.12■□□□□ 0.65
CACNA1A-249ENST00000637777 ITPK1Q13572 414 aa19.12■□□□□ 0.65
CACNA1A-249ENST00000637777 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
CACNA1A-249ENST00000637777 MRC1P22897 1456 aa19.11■□□□□ 0.65
CACNA1A-249ENST00000637777 WDR43Q15061 677 aaKnown RBP eCLIP19.11■□□□□ 0.65
CACNA1A-249ENST00000637777 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
CACNA1A-249ENST00000637777 PRKRIP1Q9H875 184 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-249ENST00000637777 POLD1P28340 1107 aa19.1■□□□□ 0.65
CACNA1A-249ENST00000637777 SLC39A6Q13433 755 aa19.1■□□□□ 0.65
CACNA1A-249ENST00000637777 KLHL34Q8N239 644 aa19.1■□□□□ 0.65
CACNA1A-249ENST00000637777 SLC16A10Q8TF71 515 aa19.1■□□□□ 0.65
CACNA1A-249ENST00000637777 COL23A1Q86Y22 540 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-249ENST00000637777 ADAMTS7Q9UKP4 1686 aa19.08■□□□□ 0.65
CACNA1A-249ENST00000637777 UBR3Q6ZT12 1888 aa19.08■□□□□ 0.65
CACNA1A-249ENST00000637777 MSL1Q68DK7 614 aa19.08■□□□□ 0.64
CACNA1A-249ENST00000637777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-249ENST00000637777 SMIM5Q71RC9 77 aa19.07■□□□□ 0.64
CACNA1A-249ENST00000637777 MCM10Q7L590 875 aa19.07■□□□□ 0.64
CACNA1A-249ENST00000637777 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
CACNA1A-249ENST00000637777 RTCBQ9Y3I0 505 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-249ENST00000637777 ZNF831Q5JPB2 1677 aa19.06■□□□□ 0.64
CACNA1A-249ENST00000637777 SLC4A9Q96Q91 983 aa19.06■□□□□ 0.64
CACNA1A-249ENST00000637777 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
CACNA1A-249ENST00000637777 COL5A3P25940 1745 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-249ENST00000637777 SSFA2P28290 1259 aa19.05■□□□□ 0.64
CACNA1A-249ENST00000637777 PTGER2P43116 358 aa19.05■□□□□ 0.64
CACNA1A-249ENST00000637777 DCTN1Q14203 1278 aa19.05■□□□□ 0.64
CACNA1A-249ENST00000637777 ARXQ96QS3 562 aa19.05■□□□□ 0.64
CACNA1A-249ENST00000637777 BTBD11A6QL63 1104 aa19.04■□□□□ 0.64
CACNA1A-249ENST00000637777 ANP32CO43423 234 aa19.04■□□□□ 0.64
CACNA1A-249ENST00000637777 TJP1Q07157 1748 aa19.04■□□□□ 0.64
CACNA1A-249ENST00000637777 SIPA1L3O60292 1781 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-249ENST00000637777 CNTNAP4Q9C0A0 1308 aa19.03■□□□□ 0.64
CACNA1A-249ENST00000637777 CRKLP46109 303 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-249ENST00000637777 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
CACNA1A-249ENST00000637777 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
CACNA1A-249ENST00000637777 CCDC146Q8IYE0 955 aa19.03■□□□□ 0.64
CACNA1A-249ENST00000637777 KCPQ6ZWJ8 1503 aa19.02■□□□□ 0.64
CACNA1A-249ENST00000637777 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
CACNA1A-249ENST00000637777 TRAPPC3LQ5T215 181 aa19.02■□□□□ 0.64
CACNA1A-249ENST00000637777 AMIGO3Q86WK7 504 aa19.02■□□□□ 0.64
CACNA1A-249ENST00000637777 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
CACNA1A-249ENST00000637777 HTATSF1O43719 755 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-249ENST00000637777 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-249ENST00000637777 ZNF790Q6PG37 636 aa19.01■□□□□ 0.63
CACNA1A-249ENST00000637777 PLEKHF1Q96S99 279 aa19.01■□□□□ 0.63
CACNA1A-249ENST00000637777 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
CACNA1A-249ENST00000637777 RFC4P35249 363 aa19■□□□□ 0.63
CACNA1A-249ENST00000637777 FMNL2Q96PY5 1086 aa19■□□□□ 0.63
CACNA1A-249ENST00000637777 FHDC1Q9C0D6 1143 aaPredicted RBP19■□□□□ 0.63
CACNA1A-249ENST00000637777 MYH14Q7Z406 1995 aaKnown RBP19■□□□□ 0.63
CACNA1A-249ENST00000637777 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
CACNA1A-249ENST00000637777 NEUROD2Q15784 382 aa18.99■□□□□ 0.63
CACNA1A-249ENST00000637777 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
CACNA1A-249ENST00000637777 STARD3NLO95772 234 aa18.98■□□□□ 0.63
CACNA1A-249ENST00000637777 ADRA2BP18089 450 aa18.98■□□□□ 0.63
CACNA1A-249ENST00000637777 RIPK4P57078 832 aa18.98■□□□□ 0.63
CACNA1A-249ENST00000637777 VSIG10Q8N0Z9 540 aa18.98■□□□□ 0.63
CACNA1A-249ENST00000637777 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-249ENST00000637777 SGIP1Q9BQI5 828 aa18.98■□□□□ 0.63
CACNA1A-249ENST00000637777 CICQ96RK0 1608 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-249ENST00000637777 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-249ENST00000637777 ZNF330Q9Y3S2 320 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-249ENST00000637777 HEG1Q9ULI3 1381 aa18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 NPM2Q86SE8 214 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 ADAMTS8Q9UP79 889 aa18.96■□□□□ 0.63
CACNA1A-249ENST00000637777 C4AP0C0L4 1744 aa18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 KCNQ3O43525 872 aa18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 CYP19A1P11511 503 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms