RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 SURF6O75683 361 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 HSCBQ8IWL3 235 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 NFATC2IPQ8NCF5 419 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 SRCIN1Q9C0H9 1055 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 GNAI3P08754 354 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 HSP90AB1P08238 724 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 CASC1Q6TDU7 716 aa11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 RGPD8O14715 1765 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-248ENST00000637774 ZNF335Q9H4Z2 1342 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-248ENST00000637774 PTCD1O75127 700 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-248ENST00000637774 MAP4K4O95819 1239 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-248ENST00000637774 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-248ENST00000637774 SRGAP3O43295 1099 aa11.97□□□□□ -0.49
CACNA1A-248ENST00000637774 NFKBIBQ15653 356 aa11.97□□□□□ -0.49
CACNA1A-248ENST00000637774 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 KIAA0232Q92628 1395 aa11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 CRB1P82279 1406 aa11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 DCTPP1Q9H773 170 aa11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 KAT6BQ8WYB5 2073 aa11.96□□□□□ -0.49
CACNA1A-248ENST00000637774 PNMA6EA0A0J9YXQ4 647 aa11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 FRAT2O75474 233 aaPredicted RBP11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 CABP4P57796 275 aa11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 NOL8Q76FK4 1167 aaKnown RBP11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 CHMP3Q9Y3E7 222 aa11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 KDRP35968 1356 aa11.96□□□□□ -0.5
CACNA1A-248ENST00000637774 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
CACNA1A-248ENST00000637774 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
CACNA1A-248ENST00000637774 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-248ENST00000637774 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
CACNA1A-248ENST00000637774 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
CACNA1A-248ENST00000637774 CDC45O75419 566 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 SLAIN2Q9P270 581 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 ERBB3P21860 1342 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 NBPF7P0C2Y1 421 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 BMP2KLQ5H9B9 411 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 SIL1Q9H173 461 aa11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-248ENST00000637774 KNDC1Q76NI1 1749 aa11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 MON2Q7Z3U7 1717 aa11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 PPP1R42Q7Z4L9 355 aa11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 RTL1A6NKG5 1358 aa11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 C1orf167Q5SNV9 1468 aa11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 IFNL2Q8IZJ0 200 aa11.93□□□□□ -0.5
CACNA1A-248ENST00000637774 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
CACNA1A-248ENST00000637774 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-248ENST00000637774 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
CACNA1A-248ENST00000637774 USP44Q9H0E7 712 aa11.92□□□□□ -0.5
CACNA1A-248ENST00000637774 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
CACNA1A-248ENST00000637774 SDSP20132 328 aa11.91□□□□□ -0.5
CACNA1A-248ENST00000637774 GZF1Q9H116 711 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-248ENST00000637774 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
CACNA1A-248ENST00000637774 GSPT1P15170 499 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-248ENST00000637774 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
CACNA1A-248ENST00000637774 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 EIF5BO60841 1220 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 GIGYF1O75420 1035 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 PA2G4Q9UQ80 394 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-248ENST00000637774 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.51
CACNA1A-248ENST00000637774 NUTM2BA6NNL0 878 aaPredicted RBP11.9□□□□□ -0.51
CACNA1A-248ENST00000637774 NUTM2EB1AL46 878 aaPredicted RBP11.9□□□□□ -0.51
CACNA1A-248ENST00000637774 ADAMTS2O95450 1211 aa11.9□□□□□ -0.51
CACNA1A-248ENST00000637774 NUTM2AQ8IVF1 878 aaPredicted RBP11.9□□□□□ -0.51
CACNA1A-248ENST00000637774 MYD88Q99836 296 aa11.9□□□□□ -0.51
CACNA1A-248ENST00000637774 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
CACNA1A-248ENST00000637774 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
CACNA1A-248ENST00000637774 XAGE3Q8WTP9 111 aa11.89□□□□□ -0.51
CACNA1A-248ENST00000637774 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
CACNA1A-248ENST00000637774 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
CACNA1A-248ENST00000637774 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
CACNA1A-248ENST00000637774 MX1P20591 662 aa11.88□□□□□ -0.51
CACNA1A-248ENST00000637774 PDE1AP54750 535 aa11.88□□□□□ -0.51
CACNA1A-248ENST00000637774 PHKG2P15735 406 aa11.88□□□□□ -0.51
CACNA1A-248ENST00000637774 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-248ENST00000637774 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-248ENST00000637774 PIK3C2AO00443 1686 aa11.88□□□□□ -0.51
CACNA1A-248ENST00000637774 ZCRB1Q8TBF4 217 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms