RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 SLC52A2Q9HAB3 445 aa12.11□□□□□ -0.47
CACNA1A-239ENST00000637297 HTATSF1O43719 755 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-239ENST00000637297 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
CACNA1A-239ENST00000637297 PNISRQ8TF01 805 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-239ENST00000637297 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-239ENST00000637297 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 LMOD3Q0VAK6 560 aa12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 MCM10Q7L590 875 aa12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 IL17REQ8NFR9 667 aa12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 ASAP1Q9ULH1 1129 aa12.09□□□□□ -0.47
CACNA1A-239ENST00000637297 DCTN1Q14203 1278 aa12.08□□□□□ -0.48
CACNA1A-239ENST00000637297 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
CACNA1A-239ENST00000637297 PROM2Q8N271 834 aa12.08□□□□□ -0.48
CACNA1A-239ENST00000637297 ATG3Q9NT62 314 aa12.08□□□□□ -0.48
CACNA1A-239ENST00000637297 RRP7AQ9Y3A4 280 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-239ENST00000637297 LY75O60449 1722 aa12.08□□□□□ -0.48
CACNA1A-239ENST00000637297 RREB1Q92766 1687 aa12.07□□□□□ -0.48
CACNA1A-239ENST00000637297 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
CACNA1A-239ENST00000637297 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
CACNA1A-239ENST00000637297 NUP188Q5SRE5 1749 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 BTBD11A6QL63 1104 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 APAF1O14727 1248 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 KCNQ4P56696 695 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 SIK1P57059 783 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 SLC39A6Q13433 755 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
CACNA1A-239ENST00000637297 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-239ENST00000637297 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
CACNA1A-239ENST00000637297 MRC1P22897 1456 aa12.04□□□□□ -0.48
CACNA1A-239ENST00000637297 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
CACNA1A-239ENST00000637297 SIPA1L3O60292 1781 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-239ENST00000637297 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
CACNA1A-239ENST00000637297 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-239ENST00000637297 R3HDM1Q15032 1099 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-239ENST00000637297 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
CACNA1A-239ENST00000637297 ZNF790Q6PG37 636 aa12.03□□□□□ -0.48
CACNA1A-239ENST00000637297 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-239ENST00000637297 LAS1LQ9Y4W2 734 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-239ENST00000637297 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
CACNA1A-239ENST00000637297 AK7Q96M32 723 aa12.02□□□□□ -0.49
CACNA1A-239ENST00000637297 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
CACNA1A-239ENST00000637297 C5P01031 1676 aa12.02□□□□□ -0.49
CACNA1A-239ENST00000637297 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-239ENST00000637297 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
CACNA1A-239ENST00000637297 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
CACNA1A-239ENST00000637297 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
CACNA1A-239ENST00000637297 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-239ENST00000637297 MSH5O43196 834 aa12□□□□□ -0.49
CACNA1A-239ENST00000637297 TEX13AQ9BXU3 409 aaPredicted RBP12□□□□□ -0.49
CACNA1A-239ENST00000637297 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
CACNA1A-239ENST00000637297 TSPYL4Q9UJ04 414 aa12□□□□□ -0.49
CACNA1A-239ENST00000637297 PAPPAQ13219 1627 aa12□□□□□ -0.49
CACNA1A-239ENST00000637297 KCNQ3O43525 872 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 ITPK1Q13572 414 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 ZNF496Q96IT1 587 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 ZNF831Q5JPB2 1677 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
CACNA1A-239ENST00000637297 UBR2Q8IWV8 1755 aa11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 STARD3NLO95772 234 aa11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 NPM2Q86SE8 214 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
CACNA1A-239ENST00000637297 HEG1Q9ULI3 1381 aa11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 GNPATO15228 680 aa11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 PHF14O94880 888 aa11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 SNRPA1P09661 255 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 FLAD1Q8NFF5 587 aa11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-239ENST00000637297 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 CRKLP46109 303 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 GNAI1P63096 354 aa11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 CCDC27Q2M243 656 aa11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 WWC1Q8IX03 1113 aa11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-239ENST00000637297 MYH14Q7Z406 1995 aaKnown RBP11.96□□□□□ -0.5
CACNA1A-239ENST00000637297 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 TJP1Q07157 1748 aa11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 QSER1Q2KHR3 1735 aa11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 CCDC87Q9NVE4 849 aa11.95□□□□□ -0.5
CACNA1A-239ENST00000637297 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms