RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	DDX27	Q96GQ7	796 aa	Known RBP	5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	PHRF1	Q9P1Y6	1649 aa	Known RBP	5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	ABCA3	Q99758	1704 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	CPSF1	Q10570	1443 aa	Known RBP	5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	SSH2	Q76I76	1423 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	ONECUT3	O60422	494 aa	Predicted RBP	5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	CAMK2B	Q13554	666 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	NUTM2D	Q5VT03	806 aa	Predicted RBP	5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	BRINP3	Q76B58	766 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	CLUAP1	Q96AJ1	413 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	CARD11	Q9BXL7	1154 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	TTC21A	Q8NDW8	1320 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	SLIT3	O75094	1523 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	NWD2	Q9ULI1	1742 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	PLEKHG2	Q9H7P9	1386 aa		5.01	□□□□□ -1.61
LGI1-222	ENST00000636754	NEUROD1	Q13562	356 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	TMEM132E	Q6IEE7	984 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	LRRC59	Q96AG4	307 aa	Known RBP	5	□□□□□ -1.61
LGI1-222	ENST00000636754	CRISPLD2	Q9H0B8	497 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	USP31	Q70CQ4	1352 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	TRAK2	O60296	914 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	DDRGK1	Q96HY6	314 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	ADAM33	Q9BZ11	813 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	WBP1L	Q9NX94	342 aa		5	□□□□□ -1.61
LGI1-222	ENST00000636754	PNPLA6	Q8IY17	1366 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	EDC4	Q6P2E9	1401 aa	Known RBP	4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	TMF1	P82094	1093 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	NBPF1	Q3BBV0	1214 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	TESK2	Q96S53	571 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	TRAK1	Q9UPV9	953 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	MYOM1	P52179	1685 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	NSD2	O96028	1365 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	KIF24	Q5T7B8	1368 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	USP6	P35125	1406 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	PPIP5K1	Q6PFW1	1433 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754		A6NJR5	290 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	POTEC	B2RU33	542 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	PPP1R3G	B7ZBB8	358 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	KRTAP4-8	Q9BYQ9	185 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	ANKRD26	Q9UPS8	1709 aa		4.99	□□□□□ -1.61
LGI1-222	ENST00000636754	SPATA31A3	Q5VYP0	1347 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	COL14A1	Q05707	1796 aa	Known RBP	4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	ANKRD36B	Q8N2N9	1353 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	RGPD8	O14715	1765 aa	Predicted RBP	4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	WAPL	Q7Z5K2	1190 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	KCTD17	Q8N5Z5	321 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	NUDT16	Q96DE0	195 aa	Known RBP	4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	ZFR	Q96KR1	1074 aa	Known RBP	4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	CDK19	Q9BWU1	502 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	STK26	Q9P289	416 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	USP19	O94966	1318 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	CPD	O75976	1380 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	NPC1L1	Q9UHC9	1359 aa		4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	FAM208A	Q9UK61	1670 aa	Known RBP	4.98	□□□□□ -1.61
LGI1-222	ENST00000636754	NFX1	Q12986	1120 aa	Known RBP	4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	PRR36	Q9H6K5	1346 aa		4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	CD163L1	Q9NR16	1453 aa		4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	GPR37	O15354	613 aa		4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	PROX2	Q3B8N5	592 aa		4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	KIF20B	Q96Q89	1820 aa		4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	TERF2IP	Q9NYB0	399 aa		4.97	□□□□□ -1.61
LGI1-222	ENST00000636754	PIK3C2A	O00443	1686 aa		4.96	□□□□□ -1.61
LGI1-222	ENST00000636754	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.96	□□□□□ -1.61
LGI1-222	ENST00000636754	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	RTL1	A6NKG5	1358 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	WASHC2A	Q641Q2	1341 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	HSPA1L	P34931	641 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	PARP9	Q8IXQ6	854 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	TSR3	Q9UJK0	312 aa	Known RBP	4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	NRAP	Q86VF7	1730 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	PLCH1	Q4KWH8	1693 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	LMO7	Q8WWI1	1683 aa		4.96	□□□□□ -1.62
LGI1-222	ENST00000636754	OVOS2	A0A0J9YW53	1432 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	OVOS2	Q6IE36	1432 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	RAD21	O60216	631 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	EVI5	O60447	810 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	PRR20E	P86478	221 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	PRR20C	P86479	221 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	PRR20D	P86480	221 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	PRR20B	P86481	221 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	PRR20A	P86496	221 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	ESCO1	Q5FWF5	840 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	KRT28	Q7Z3Y7	464 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	TRAIP	Q9BWF2	469 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	SLIT2	O94813	1529 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	ST20-MTHFS	A0A0A6YYL1	179 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	SRPK2	P78362	688 aa	Known RBP	4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	KCNH5	Q8NCM2	988 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	CCDC102A	Q96A19	550 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	GOPC	Q9HD26	462 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	KIAA1468	Q9P260	1216 aa		4.95	□□□□□ -1.62
LGI1-222	ENST00000636754	NFAT5	O94916	1531 aa		4.94	□□□□□ -1.62
LGI1-222	ENST00000636754	SMG6	Q86US8	1419 aa	Known RBP	4.94	□□□□□ -1.62
LGI1-222	ENST00000636754	DISP3	Q9P2K9	1392 aa		4.94	□□□□□ -1.62
LGI1-222	ENST00000636754	ACE	P12821	1306 aa		4.94	□□□□□ -1.62
LGI1-222	ENST00000636754	AMHR2	Q16671	573 aa		4.94	□□□□□ -1.62
LGI1-222	ENST00000636754	PPP1R15B	Q5SWA1	713 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms