RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 ZBED9Q6R2W3 1325 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 BICD1Q96G01 975 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 PDRG1Q9NUG6 133 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 KCNH5Q8NCM2 988 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 PPP6R1Q9UPN7 881 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 PICALMQ13492 652 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 KLHL10Q6JEL2 608 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 ERCC4Q92889 916 aaPredicted RBP10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 GJA3Q9Y6H8 435 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 USP8P40818 1118 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 NBPF6Q5VWK0 638 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 BLOC1S2Q6QNY1 142 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 NBPF5PQ86XG9 351 aaPredicted RBP10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 NBPF4Q96M43 638 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 GUCY1B3Q02153 619 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 ANKRD1Q15327 319 aa10.39□□□□□ -0.75
CHRNA7-219ENST00000636709 TSPY26PQ9H489 355 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 CABP5Q9NP86 173 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 ATAD2BQ9ULI0 1458 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 CCDC113Q9H0I3 377 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 PPP2R1AP30153 589 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 AKAP2Q9Y2D5 859 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 THUMPD2Q9BTF0 503 aaKnown RBP10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 KIF20AO95235 890 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 ANKRD18BA2A2Z9 1011 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 CASTP20810 708 aaKnown RBP10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 JAKMIP3Q5VZ66 844 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 EP400NLQ6ZTU2 488 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 DPH6Q7L8W6 267 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 KRT28Q7Z3Y7 464 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 KIF7Q2M1P5 1343 aa10.38□□□□□ -0.75
CHRNA7-219ENST00000636709 NASPP49321 788 aaPredicted RBP10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 GRIPAP1Q4V328 841 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 CUX1P39880 1505 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 DMRT2Q9Y5R5 561 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 PABPN1LA6NDY0 278 aaKnown RBP10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 PDZRN3Q9UPQ7 1066 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 PUS7Q96PZ0 661 aaKnown RBP10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 CTNNA2P26232 953 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 NLRP5P59047 1200 aa10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 MPHOSPH6Q99547 160 aaKnown RBP10.37□□□□□ -0.75
CHRNA7-219ENST00000636709 SYCP3Q8IZU3 236 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 ATP5J2-PTCD1G3V325 749 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 TOM1O60784 492 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 CCDC8Q9H0W5 538 aaPredicted RBP10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 RIMBP2O15034 1052 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 HLA-DOAP06340 250 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 LMOD1P29536 600 aaPredicted RBP10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 NF2P35240 595 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 IQSEC3Q9UPP2 1182 aaPredicted RBP10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 WASF1Q92558 559 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 TSG101Q99816 390 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
CHRNA7-219ENST00000636709 CAMK4Q16566 473 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 NBPF8Q3BBV2 869 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 NBPF14Q5TI25 921 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 EPB41L2O43491 1005 aaKnown RBP10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 ARL1P40616 181 aaPredicted RBP10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 CCDC178Q5BJE1 867 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 RAB11FIP4Q86YS3 637 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 LETM1O95202 739 aaPredicted RBP10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 TAF4BQ92750 862 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 AMOTL2Q9Y2J4 779 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 TMX1Q9H3N1 280 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 HSP90AB3PQ58FF7 597 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 ZNF397Q8NF99 534 aaPredicted RBP10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 CCDC39Q9UFE4 941 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 CEP131Q9UPN4 1083 aa10.35□□□□□ -0.75
CHRNA7-219ENST00000636709 DUSP27Q5VZP5 1158 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 IQCA1Q86XH1 822 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 NAIPQ13075 1403 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 TAF12Q16514 161 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 TMEM266Q2M3C6 531 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 CACNA2D4Q7Z3S7 1137 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 HDAC9Q9UKV0 1011 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 CETN2P41208 172 aa10.34□□□□□ -0.75
CHRNA7-219ENST00000636709 TSPY2A6NKD2 308 aa10.33□□□□□ -0.76
CHRNA7-219ENST00000636709 LMAN1P49257 510 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms