RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 SLC15A2Q16348 729 aa16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 SMARCC1Q92922 1105 aaPredicted RBP16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 SCN11AQ9UI33 1791 aa16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 FCHSD2O94868 740 aa16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 CABP4P57796 275 aa16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 PRKRIP1Q9H875 184 aaPredicted RBP16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
CHRNA1-208ENST00000636168 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
CHRNA1-208ENST00000636168 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
CHRNA1-208ENST00000636168 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
CHRNA1-208ENST00000636168 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
CHRNA1-208ENST00000636168 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
CHRNA1-208ENST00000636168 ATG3Q9NT62 314 aa16.82■□□□□ 0.28
CHRNA1-208ENST00000636168 ZNF827Q17R98 1081 aa16.81■□□□□ 0.28
CHRNA1-208ENST00000636168 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
CHRNA1-208ENST00000636168 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
CHRNA1-208ENST00000636168 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
CHRNA1-208ENST00000636168 PDGFDQ9GZP0 370 aaPredicted RBP16.8■□□□□ 0.28
CHRNA1-208ENST00000636168 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
CHRNA1-208ENST00000636168 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
CHRNA1-208ENST00000636168 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
CHRNA1-208ENST00000636168 SIK1P57059 783 aa16.79■□□□□ 0.28
CHRNA1-208ENST00000636168 TAF1LQ8IZX4 1826 aa16.79■□□□□ 0.28
CHRNA1-208ENST00000636168 C5P01031 1676 aa16.79■□□□□ 0.28
CHRNA1-208ENST00000636168 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
CHRNA1-208ENST00000636168 ADAMTS7Q9UKP4 1686 aa16.78■□□□□ 0.28
CHRNA1-208ENST00000636168 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
CHRNA1-208ENST00000636168 MRC1P22897 1456 aa16.77■□□□□ 0.28
CHRNA1-208ENST00000636168 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.27
CHRNA1-208ENST00000636168 LRP5O75197 1615 aa16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 NEFMP07197 916 aa16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 HMGB2P26583 209 aaKnown RBP16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 PLEKHF1Q96S99 279 aa16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
CHRNA1-208ENST00000636168 TUBGCP6Q96RT7 1819 aa16.75■□□□□ 0.27
CHRNA1-208ENST00000636168 C4BP0C0L5 1744 aa16.74■□□□□ 0.27
CHRNA1-208ENST00000636168 QSER1Q2KHR3 1735 aa16.74■□□□□ 0.27
CHRNA1-208ENST00000636168 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
CHRNA1-208ENST00000636168 ITPK1Q13572 414 aa16.74■□□□□ 0.27
CHRNA1-208ENST00000636168 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
CHRNA1-208ENST00000636168 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
CHRNA1-208ENST00000636168 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
CHRNA1-208ENST00000636168 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
CHRNA1-208ENST00000636168 PNPLA7Q6ZV29 1317 aa16.73■□□□□ 0.27
CHRNA1-208ENST00000636168 TEFQ10587 303 aa16.73■□□□□ 0.27
CHRNA1-208ENST00000636168 SPON1Q9HCB6 807 aa16.73■□□□□ 0.27
CHRNA1-208ENST00000636168 CEMIPQ8WUJ3 1361 aa16.72■□□□□ 0.27
CHRNA1-208ENST00000636168 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
CHRNA1-208ENST00000636168 RTF1Q92541 710 aaKnown RBP16.72■□□□□ 0.27
CHRNA1-208ENST00000636168 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
CHRNA1-208ENST00000636168 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
CHRNA1-208ENST00000636168 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHRNA1-208ENST00000636168 AK7Q96M32 723 aa16.71■□□□□ 0.27
CHRNA1-208ENST00000636168 MCM10Q7L590 875 aa16.71■□□□□ 0.27
CHRNA1-208ENST00000636168 DLG5Q8TDM6 1919 aa16.71■□□□□ 0.26
CHRNA1-208ENST00000636168 MTFR1LQ9H019 292 aa16.7■□□□□ 0.26
CHRNA1-208ENST00000636168 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-208ENST00000636168 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
CHRNA1-208ENST00000636168 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-208ENST00000636168 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
CHRNA1-208ENST00000636168 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
CHRNA1-208ENST00000636168 UBR3Q6ZT12 1888 aa16.69■□□□□ 0.26
CHRNA1-208ENST00000636168 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
CHRNA1-208ENST00000636168 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
CHRNA1-208ENST00000636168 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-208ENST00000636168 HNRNPUQ00839 825 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHRNA1-208ENST00000636168 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
CHRNA1-208ENST00000636168 COL23A1Q86Y22 540 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-208ENST00000636168 KCPQ6ZWJ8 1503 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 GNPATO15228 680 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 PHF14O94880 888 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 SMIM5Q71RC9 77 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 TJP1Q07157 1748 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
CHRNA1-208ENST00000636168 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
CHRNA1-208ENST00000636168 PTGER2P43116 358 aa16.66■□□□□ 0.26
CHRNA1-208ENST00000636168 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
CHRNA1-208ENST00000636168 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
CHRNA1-208ENST00000636168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 SSFA2P28290 1259 aa16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 PPP1R1BQ9UD71 204 aaPredicted RBP16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 RC3H1Q5TC82 1133 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
CHRNA1-208ENST00000636168 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
CHRNA1-208ENST00000636168 RIPK4P57078 832 aa16.64■□□□□ 0.25
CHRNA1-208ENST00000636168 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
CHRNA1-208ENST00000636168 RUNDC1Q96C34 613 aa16.64■□□□□ 0.25
CHRNA1-208ENST00000636168 ZNF496Q96IT1 587 aaPredicted RBP16.64■□□□□ 0.25
CHRNA1-208ENST00000636168 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
CHRNA1-208ENST00000636168 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms