RNA–Protein interactions for RNA: ENST00000636138.1

CACNA1D-208, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-208ENST00000636138 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 TMF1P82094 1093 aa12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 AK7Q96M32 723 aa12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 BRCA1P38398 1863 aaKnown RBP12.31□□□□□ -0.44
CACNA1D-208ENST00000636138 REM2Q8IYK8 340 aaPredicted RBP12.3□□□□□ -0.44
CACNA1D-208ENST00000636138 ARFGEF1Q9Y6D6 1849 aa12.3□□□□□ -0.44
CACNA1D-208ENST00000636138 C10orf71Q711Q0 1435 aa12.29□□□□□ -0.44
CACNA1D-208ENST00000636138 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
CACNA1D-208ENST00000636138 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
CACNA1D-208ENST00000636138 EVC2Q86UK5 1308 aa12.29□□□□□ -0.44
CACNA1D-208ENST00000636138 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
CACNA1D-208ENST00000636138 PALLDQ8WX93 1383 aa12.29□□□□□ -0.44
CACNA1D-208ENST00000636138 MEGF6O75095 1541 aa12.28□□□□□ -0.44
CACNA1D-208ENST00000636138 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
CACNA1D-208ENST00000636138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
CACNA1D-208ENST00000636138 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
CACNA1D-208ENST00000636138 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
CACNA1D-208ENST00000636138 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
CACNA1D-208ENST00000636138 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
CACNA1D-208ENST00000636138 PCNTO95613 3336 aa12.27□□□□□ -0.45
CACNA1D-208ENST00000636138 C9orf131Q5VYM1 1079 aa12.27□□□□□ -0.45
CACNA1D-208ENST00000636138 ITGB4P16144 1822 aa12.26□□□□□ -0.45
CACNA1D-208ENST00000636138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
CACNA1D-208ENST00000636138 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
CACNA1D-208ENST00000636138 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
CACNA1D-208ENST00000636138 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
CACNA1D-208ENST00000636138 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 FCHSD2O94868 740 aa12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 NME9Q86XW9 330 aa12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
CACNA1D-208ENST00000636138 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
CACNA1D-208ENST00000636138 PANK3Q9H999 370 aa12.24□□□□□ -0.45
CACNA1D-208ENST00000636138 RRAGCQ9HB90 399 aa12.24□□□□□ -0.45
CACNA1D-208ENST00000636138 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 A0A0G2JLW4 131 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 MMP10P09238 476 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 MIER1Q8N108 512 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 SBF1O95248 1867 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
CACNA1D-208ENST00000636138 SSFA2P28290 1259 aa12.22□□□□□ -0.45
CACNA1D-208ENST00000636138 TGFB2P61812 414 aa12.21□□□□□ -0.45
CACNA1D-208ENST00000636138 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.46
CACNA1D-208ENST00000636138 DPEP1P16444 411 aa12.2□□□□□ -0.46
CACNA1D-208ENST00000636138 MPRIPQ6WCQ1 1025 aa12.2□□□□□ -0.46
CACNA1D-208ENST00000636138 IP6K1Q92551 441 aa12.2□□□□□ -0.46
CACNA1D-208ENST00000636138 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
CACNA1D-208ENST00000636138 A0A1W2PP64 1363 aa12.19□□□□□ -0.46
CACNA1D-208ENST00000636138 GNPATO15228 680 aa12.19□□□□□ -0.46
CACNA1D-208ENST00000636138 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
CACNA1D-208ENST00000636138 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 TMC1Q8TDI8 760 aa12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 EDC4Q6P2E9 1401 aaKnown RBP12.18□□□□□ -0.46
CACNA1D-208ENST00000636138 FOXN1O15353 648 aa12.17□□□□□ -0.46
CACNA1D-208ENST00000636138 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
CACNA1D-208ENST00000636138 MKRN1Q9UHC7 482 aaKnown RBP12.17□□□□□ -0.46
CACNA1D-208ENST00000636138 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
CACNA1D-208ENST00000636138 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
CACNA1D-208ENST00000636138 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
CACNA1D-208ENST00000636138 AIDAQ96BJ3 306 aa12.16□□□□□ -0.46
CACNA1D-208ENST00000636138 PRDM10Q9NQV6 1147 aa12.16□□□□□ -0.46
CACNA1D-208ENST00000636138 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
CACNA1D-208ENST00000636138 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
CACNA1D-208ENST00000636138 HOXC9P31274 260 aa12.15□□□□□ -0.46
CACNA1D-208ENST00000636138 AMPHP49418 695 aa12.15□□□□□ -0.46
CACNA1D-208ENST00000636138 CNGB1Q14028 1251 aaPredicted RBP12.15□□□□□ -0.46
CACNA1D-208ENST00000636138 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.46
CACNA1D-208ENST00000636138 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
CACNA1D-208ENST00000636138 CCDC88AQ3V6T2 1871 aa12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 DALRD3Q5D0E6 543 aaKnown RBP12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 POTEHQ6S545 545 aa12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
CACNA1D-208ENST00000636138 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 CTCFP49711 727 aaPredicted RBP12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 SIK1P57059 783 aa12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 RTL1A6NKG5 1358 aa12.13□□□□□ -0.47
CACNA1D-208ENST00000636138 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
CACNA1D-208ENST00000636138 RASSF7Q02833 373 aa12.12□□□□□ -0.47
CACNA1D-208ENST00000636138 MLLT1Q03111 559 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms