RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 PDE1AP54750 535 aa17.56■□□□□ 0.4
PTBP1-221ENST00000635647 CCDC30Q5VVM6 783 aa17.56■□□□□ 0.4
PTBP1-221ENST00000635647 SIL1Q9H173 461 aa17.56■□□□□ 0.4
PTBP1-221ENST00000635647 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
PTBP1-221ENST00000635647 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
PTBP1-221ENST00000635647 FLIIQ13045 1269 aa17.56■□□□□ 0.4
PTBP1-221ENST00000635647 PTPRCP08575 1304 aa17.55■□□□□ 0.4
PTBP1-221ENST00000635647 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-221ENST00000635647 MX1P20591 662 aa17.54■□□□□ 0.4
PTBP1-221ENST00000635647 GNAI3P08754 354 aa17.54■□□□□ 0.4
PTBP1-221ENST00000635647 EYA1Q99502 592 aa17.54■□□□□ 0.4
PTBP1-221ENST00000635647 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
PTBP1-221ENST00000635647 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
PTBP1-221ENST00000635647 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
PTBP1-221ENST00000635647 USP32Q8NFA0 1604 aa17.53■□□□□ 0.4
PTBP1-221ENST00000635647 SYCE3A1L190 88 aa17.53■□□□□ 0.4
PTBP1-221ENST00000635647 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
PTBP1-221ENST00000635647 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
PTBP1-221ENST00000635647 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
PTBP1-221ENST00000635647 KLHL40Q2TBA0 621 aa17.52■□□□□ 0.4
PTBP1-221ENST00000635647 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.4
PTBP1-221ENST00000635647 ATP7BP35670 1465 aa17.52■□□□□ 0.39
PTBP1-221ENST00000635647 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.39
PTBP1-221ENST00000635647 UQCRHLA0A096LP55 91 aa17.51■□□□□ 0.39
PTBP1-221ENST00000635647 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
PTBP1-221ENST00000635647 UQCRHP07919 91 aa17.51■□□□□ 0.39
PTBP1-221ENST00000635647 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-221ENST00000635647 LTKP29376 864 aa17.51■□□□□ 0.39
PTBP1-221ENST00000635647 MED14O60244 1454 aa17.51■□□□□ 0.39
PTBP1-221ENST00000635647 VPS37CA5D8V6 355 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-221ENST00000635647 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
PTBP1-221ENST00000635647 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
PTBP1-221ENST00000635647 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
PTBP1-221ENST00000635647 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.5■□□□□ 0.39
PTBP1-221ENST00000635647 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
PTBP1-221ENST00000635647 TSPOAP1O95153 1857 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 PIK3R4Q99570 1358 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 ZSCAN23Q3MJ62 389 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
PTBP1-221ENST00000635647 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
PTBP1-221ENST00000635647 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
PTBP1-221ENST00000635647 MYL6BP14649 208 aa17.49■□□□□ 0.39
PTBP1-221ENST00000635647 CCDC173Q0VFZ6 552 aa17.49■□□□□ 0.39
PTBP1-221ENST00000635647 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-221ENST00000635647 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
PTBP1-221ENST00000635647 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
PTBP1-221ENST00000635647 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
PTBP1-221ENST00000635647 CPS1P31327 1500 aa17.49■□□□□ 0.39
PTBP1-221ENST00000635647 AATKQ6ZMQ8 1374 aa17.48■□□□□ 0.39
PTBP1-221ENST00000635647 PRIM1P49642 420 aaKnown RBP17.48■□□□□ 0.39
PTBP1-221ENST00000635647 PPP6R1Q9UPN7 881 aa17.48■□□□□ 0.39
PTBP1-221ENST00000635647 TNRQ92752 1358 aa17.48■□□□□ 0.39
PTBP1-221ENST00000635647 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
PTBP1-221ENST00000635647 TAF7Q15545 349 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-221ENST00000635647 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-221ENST00000635647 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
PTBP1-221ENST00000635647 CDK12Q9NYV4 1490 aaPredicted RBP17.47■□□□□ 0.39
PTBP1-221ENST00000635647 FIBPO43427 364 aa17.47■□□□□ 0.39
PTBP1-221ENST00000635647 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
PTBP1-221ENST00000635647 DDIT3P35638 169 aa17.47■□□□□ 0.39
PTBP1-221ENST00000635647 ZSCAN30Q86W11 494 aa17.47■□□□□ 0.39
PTBP1-221ENST00000635647 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
PTBP1-221ENST00000635647 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
PTBP1-221ENST00000635647 ESYT1Q9BSJ8 1104 aa17.46■□□□□ 0.39
PTBP1-221ENST00000635647 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
PTBP1-221ENST00000635647 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
PTBP1-221ENST00000635647 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
PTBP1-221ENST00000635647 FBXW7Q969H0 707 aa17.45■□□□□ 0.38
PTBP1-221ENST00000635647 LRRC59Q96AG4 307 aaKnown RBP17.45■□□□□ 0.38
PTBP1-221ENST00000635647 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
PTBP1-221ENST00000635647 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
PTBP1-221ENST00000635647 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
PTBP1-221ENST00000635647 KDM4AO75164 1064 aa17.44■□□□□ 0.38
PTBP1-221ENST00000635647 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
PTBP1-221ENST00000635647 RBSNQ9H1K0 784 aa17.44■□□□□ 0.38
PTBP1-221ENST00000635647 STK3Q13188 491 aa17.43■□□□□ 0.38
PTBP1-221ENST00000635647 TCEANC2Q96MN5 208 aa17.43■□□□□ 0.38
PTBP1-221ENST00000635647 ATP8B2P98198 1209 aa17.43■□□□□ 0.38
PTBP1-221ENST00000635647 AK9Q5TCS8 1911 aa17.43■□□□□ 0.38
PTBP1-221ENST00000635647 CPA1P15085 419 aa17.43■□□□□ 0.38
PTBP1-221ENST00000635647 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 CHMLP26374 656 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 DRC7Q8IY82 874 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 IGSF3O75054 1194 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 CBX1P83916 185 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
PTBP1-221ENST00000635647 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
PTBP1-221ENST00000635647 SYAP1Q96A49 352 aaPredicted RBP17.41■□□□□ 0.38
PTBP1-221ENST00000635647 FLT4P35916 1363 aa17.41■□□□□ 0.38
PTBP1-221ENST00000635647 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
PTBP1-221ENST00000635647 IL17REQ8NFR9 667 aa17.41■□□□□ 0.38
PTBP1-221ENST00000635647 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms