RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SOS1Q07889 1333 aaPredicted RBP10□□□□□ -0.81
GPC3-204ENST00000631057 CHD2O14647 1828 aaKnown RBP10□□□□□ -0.81
GPC3-204ENST00000631057 DDX11L8A8MPP1 907 aa10□□□□□ -0.81
GPC3-204ENST00000631057 DDIT3P35638 169 aa10□□□□□ -0.81
GPC3-204ENST00000631057 CCT4P50991 539 aaKnown RBP10□□□□□ -0.81
GPC3-204ENST00000631057 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
GPC3-204ENST00000631057 GSPT1P15170 499 aaKnown RBP9.99□□□□□ -0.81
GPC3-204ENST00000631057 EYA1Q99502 592 aa9.99□□□□□ -0.81
GPC3-204ENST00000631057 KIF2CQ99661 725 aa9.99□□□□□ -0.81
GPC3-204ENST00000631057 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
GPC3-204ENST00000631057 PTMSP20962 102 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 NLRP6P59044 892 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 CASC1Q6TDU7 716 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 ANKLE2Q86XL3 938 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 MEIS3Q99687 375 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 STK31Q9BXU1 1019 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 BABAM1Q9NWV8 329 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
GPC3-204ENST00000631057 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 K7ELQ4 463 aaPredicted RBP9.97□□□□□ -0.81
GPC3-204ENST00000631057 FOXO3O43524 673 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 ZNF142P52746 1687 aaPredicted RBP9.97□□□□□ -0.81
GPC3-204ENST00000631057 MAP3K5Q99683 1374 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 HSP90AA1P07900 732 aaKnown RBP9.97□□□□□ -0.81
GPC3-204ENST00000631057 HOXC9P31274 260 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 RABEP1Q15276 862 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 CCDC30Q5VVM6 783 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 GBP4Q96PP9 640 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 MIS18AQ9NYP9 233 aa9.97□□□□□ -0.81
GPC3-204ENST00000631057 PXDNLA1KZ92 1463 aa9.96□□□□□ -0.81
GPC3-204ENST00000631057 TRAK2O60296 914 aa9.96□□□□□ -0.82
GPC3-204ENST00000631057 HS6ST3Q8IZP7 471 aa9.96□□□□□ -0.82
GPC3-204ENST00000631057 PHRF1Q9P1Y6 1649 aaKnown RBP9.95□□□□□ -0.82
GPC3-204ENST00000631057 GNAI2P04899 355 aa9.95□□□□□ -0.82
GPC3-204ENST00000631057 GNAI3P08754 354 aa9.95□□□□□ -0.82
GPC3-204ENST00000631057 KCNA6P17658 529 aa9.95□□□□□ -0.82
GPC3-204ENST00000631057 RAB3GAP1Q15042 981 aa9.95□□□□□ -0.82
GPC3-204ENST00000631057 SLC4A10Q6U841 1118 aa9.95□□□□□ -0.82
GPC3-204ENST00000631057 G2E3Q7L622 706 aa9.95□□□□□ -0.82
GPC3-204ENST00000631057 KDM3BQ7LBC6 1761 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 GOLGA6L3A6NEY3 463 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 REC8O95072 547 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 SDSP20132 328 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 C16orf71Q8IYS4 520 aaPredicted RBP9.94□□□□□ -0.82
GPC3-204ENST00000631057 ABTB2Q8N961 1025 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 USP26Q9BXU7 913 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 OSBPL3Q9H4L5 887 aa9.94□□□□□ -0.82
GPC3-204ENST00000631057 LMO7Q8WWI1 1683 aa9.93□□□□□ -0.82
GPC3-204ENST00000631057 FSD2A1L4K1 749 aa9.93□□□□□ -0.82
GPC3-204ENST00000631057 F6X3S4 739 aa9.93□□□□□ -0.82
GPC3-204ENST00000631057 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
GPC3-204ENST00000631057 FLIIQ13045 1269 aa9.93□□□□□ -0.82
GPC3-204ENST00000631057 TAF7Q15545 349 aaPredicted RBP9.93□□□□□ -0.82
GPC3-204ENST00000631057 SKOR2Q2VWA4 1001 aaPredicted RBP9.93□□□□□ -0.82
GPC3-204ENST00000631057 OTUD7AQ8TE49 926 aaPredicted RBP9.93□□□□□ -0.82
GPC3-204ENST00000631057 TNPO1Q92973 898 aaKnown RBP9.93□□□□□ -0.82
GPC3-204ENST00000631057 ISY1Q9ULR0 285 aaKnown RBP9.93□□□□□ -0.82
GPC3-204ENST00000631057 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
GPC3-204ENST00000631057 NFAT5O94916 1531 aa9.93□□□□□ -0.82
GPC3-204ENST00000631057 APBB1O00213 710 aa9.92□□□□□ -0.82
GPC3-204ENST00000631057 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
GPC3-204ENST00000631057 FKBP5Q13451 457 aaPredicted RBP9.92□□□□□ -0.82
GPC3-204ENST00000631057 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
GPC3-204ENST00000631057 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
GPC3-204ENST00000631057 CHMP4AQ9BY43 222 aa9.92□□□□□ -0.82
GPC3-204ENST00000631057 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
GPC3-204ENST00000631057 MED1Q15648 1581 aaPredicted RBP9.92□□□□□ -0.82
GPC3-204ENST00000631057 ERC2O15083 957 aa9.92□□□□□ -0.82
GPC3-204ENST00000631057 NUTM2GQ5VZR2 741 aa9.92□□□□□ -0.82
GPC3-204ENST00000631057 GOLGA6L22H0YM25 854 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 ST18O60284 1047 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 PDE1AP54750 535 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 ATP8B2P98198 1209 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 CLEC17AQ6ZS10 378 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 FAM43AQ8N2R8 423 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 IL17REQ8NFR9 667 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 IP6K1Q92551 441 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 LRRCC1Q9C099 1032 aa9.91□□□□□ -0.82
GPC3-204ENST00000631057 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.82
GPC3-204ENST00000631057 CEMIPQ8WUJ3 1361 aa9.9□□□□□ -0.82
GPC3-204ENST00000631057 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.82
GPC3-204ENST00000631057 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.82
GPC3-204ENST00000631057 SRCIN1Q9C0H9 1055 aa9.9□□□□□ -0.82
GPC3-204ENST00000631057 GZF1Q9H116 711 aaPredicted RBP9.9□□□□□ -0.82
GPC3-204ENST00000631057 IBTKQ9P2D0 1353 aaPredicted RBP9.89□□□□□ -0.83
GPC3-204ENST00000631057 AOX1Q06278 1338 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 SALL3Q9BXA9 1300 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 HOXB7P09629 217 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 MRE11P49959 708 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 NUCB2P80303 420 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 HDGFL1Q5TGJ6 251 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 KCNH5Q8NCM2 988 aa9.89□□□□□ -0.83
GPC3-204ENST00000631057 CWC22Q9HCG8 908 aaKnown RBP9.89□□□□□ -0.83
GPC3-204ENST00000631057 UBTFL1P0CB47 393 aaPredicted RBP9.88□□□□□ -0.83
GPC3-204ENST00000631057 XRCC6P12956 609 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■■■□ 20.1
GPC3-204ENST00000631057 MX1P20591 662 aa9.88□□□□□ -0.83
GPC3-204ENST00000631057 EXOC6BQ9Y2D4 811 aa9.88□□□□□ -0.83
GPC3-204ENST00000631057 NCAPD2Q15021 1401 aa9.88□□□□□ -0.83
GPC3-204ENST00000631057 MCCP23508 829 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms