RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 ECM2O94769 699 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 LMAN1P49257 510 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 MACROD2A1Z1Q3 448 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 MAP3K12Q12852 859 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 CTCFLQ8NI51 663 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 NOB1Q9ULX3 412 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 LRPPRCP42704 1394 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 TAF3Q5VWG9 929 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 SPC24Q8NBT2 197 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 PODXL2Q9NZ53 605 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 GSTTP1A0A1W2PQM5 241 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 BLOC1S2Q6QNY1 142 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 CKAP2LQ8IYA6 745 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 CEP63Q96MT8 703 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 NAPBQ9H115 298 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 PDRG1Q9NUG6 133 aa7.49□□□□□ -1.21
SRGAP1-207ENST00000631006 TTC21AQ8NDW8 1320 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 A0A087WZG4 1122 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 ANKRD18BA2A2Z9 1011 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 SRGAP3O43295 1099 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 GCC1Q96CN9 775 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 FGFR1OPO95684 399 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 KRT32Q14532 448 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 FAM177A1Q8N128 213 aaPredicted RBP7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 ERLIN1O75477 346 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 CETN1Q12798 172 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 CACNA2D4Q7Z3S7 1137 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 DYDC1Q8WWB3 177 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 IFIT5Q13325 482 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 CCDC113Q9H0I3 377 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 MBD3O95983 291 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 SPA17Q15506 151 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 LARP1BQ659C4 914 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 CCDC178Q5BJE1 867 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 STXBP4Q6ZWJ1 553 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 SYCP3Q8IZU3 236 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 MYD88Q99836 296 aa7.48□□□□□ -1.21
SRGAP1-207ENST00000631006 KIF20AO95235 890 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 HMGB1P09429 215 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CCDC192P0DO97 292 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CBX1P83916 185 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 MAP2K1Q02750 393 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 SCAPERQ9BY12 1400 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 UBAP1LF5GYI3 381 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 IQCA1Q86XH1 822 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CCDC148Q8NFR7 591 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 GOPCQ9HD26 462 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CUX1P39880 1505 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 ZBED9Q6R2W3 1325 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 GOLGA6L10A0A0M3HER8 536 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 NASPP49321 788 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 NCBP1Q09161 790 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CWC27Q6UX04 472 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CCDC117Q8IWD4 279 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 PHAXQ9H814 394 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 PLS1Q14651 629 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CAVIN1Q6NZI2 390 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 PRPF40AO75400 957 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 KRT85P78386 507 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CFAP45Q9UL16 551 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 MROH2BQ7Z745 1585 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 BAG3O95817 575 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 SMTNL1A8MU46 457 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 LDHCP07864 332 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 ARL1P40616 181 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 CFAP70Q5T0N1 1121 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 TCP11L2Q8N4U5 519 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 AFAP1Q8N556 730 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 PRKRIP1Q9H875 184 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-207ENST00000631006 EIF3JO75822 258 aaKnown RBP7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 NLRP5P59047 1200 aa7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 RRS1Q15050 365 aaKnown RBP7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 SPTY2D1Q68D10 685 aaPredicted RBP7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 JAKMIP1Q96N16 626 aaKnown RBP7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 SYNCQ9H7C4 482 aa7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 SYNJ2O15056 1496 aa7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 HOMEZQ8IX15 550 aa7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 PUS7Q96PZ0 661 aaKnown RBP7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.46□□□□□ -1.21
SRGAP1-207ENST00000631006 B4DLN1 442 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 TNNT1P13805 278 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 MRPL12P52815 198 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 GSTO1P78417 241 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC12Q8WUD4 166 aaPredicted RBP7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 USP8P40818 1118 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 MTERF4Q7Z6M4 381 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 FAM43AQ8N2R8 423 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 OGFOD1Q8N543 542 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 OTUD6BQ8N6M0 293 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC194A0A1B0GVG4 234 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 TOM1O60784 492 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 PPP1R42Q7Z4L9 355 aa7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 U3KPZ7 1027 aaPredicted RBP7.46□□□□□ -1.22
SRGAP1-207ENST00000631006 CATIPQ7Z7H3 387 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms