RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-222ENST00000630907 DEFB132Q7Z7B7 95 aa34.2■■■■□ 3.07
UBE3A-222ENST00000630907 PLSCR1O15162 318 aa34.19■■■■□ 3.06
UBE3A-222ENST00000630907 TRIM35Q9UPQ4 493 aa34.19■■■■□ 3.06
UBE3A-222ENST00000630907 SENP3-EIF4A1A0A087X0R7 540 aa34.17■■■■□ 3.06
UBE3A-222ENST00000630907 EN1Q05925 392 aaPredicted RBP34.17■■■■□ 3.06
UBE3A-222ENST00000630907 VIRMAQ69YN4 1812 aaKnown RBP34.17■■■■□ 3.06
UBE3A-222ENST00000630907 THUMPD2Q9BTF0 503 aaKnown RBP34.17■■■■□ 3.06
UBE3A-222ENST00000630907 SMARCC1Q92922 1105 aaPredicted RBP34.16■■■■□ 3.06
UBE3A-222ENST00000630907 ATG3Q9NT62 314 aa34.15■■■■□ 3.06
UBE3A-222ENST00000630907 ASAP1Q9ULH1 1129 aa34.15■■■■□ 3.06
UBE3A-222ENST00000630907 CAMKK2Q96RR4 588 aa34.14■■■■□ 3.06
UBE3A-222ENST00000630907 NCBP3Q53F19 620 aaKnown RBP34.13■■■■□ 3.05
UBE3A-222ENST00000630907 EZH2Q15910 746 aaKnown RBP34.12■■■■□ 3.05
UBE3A-222ENST00000630907 PALLDQ8WX93 1383 aa34.11■■■■□ 3.05
UBE3A-222ENST00000630907 TAF7Q15545 349 aaPredicted RBP34.11■■■■□ 3.05
UBE3A-222ENST00000630907 CCDC27Q2M243 656 aa34.1■■■■□ 3.05
UBE3A-222ENST00000630907 BTBD11A6QL63 1104 aa34.09■■■■□ 3.05
UBE3A-222ENST00000630907 SALL2Q9Y467 1007 aaPredicted RBP34.09■■■■□ 3.05
UBE3A-222ENST00000630907 SLC39A6Q13433 755 aa34.08■■■■□ 3.05
UBE3A-222ENST00000630907 NGEFQ8N5V2 710 aa34.08■■■■□ 3.05
UBE3A-222ENST00000630907 TXNRD1Q16881 649 aa34.07■■■■□ 3.04
UBE3A-222ENST00000630907 SIPA1L3O60292 1781 aaPredicted RBP34.07■■■■□ 3.04
UBE3A-222ENST00000630907 PROM2Q8N271 834 aa34.06■■■■□ 3.04
UBE3A-222ENST00000630907 RGPD3A6NKT7 1758 aaPredicted RBP34.06■■■■□ 3.04
UBE3A-222ENST00000630907 RGPD4Q7Z3J3 1758 aa34.06■■■■□ 3.04
UBE3A-222ENST00000630907 TTC5Q8N0Z6 440 aa34.05■■■■□ 3.04
UBE3A-222ENST00000630907 CALD1Q05682 793 aaKnown RBP34.04■■■■□ 3.04
UBE3A-222ENST00000630907 WWC1Q8IX03 1113 aa34.04■■■■□ 3.04
UBE3A-222ENST00000630907 SLC27A3Q5K4L6 730 aa34.03■■■■□ 3.04
UBE3A-222ENST00000630907 ZNF790Q6PG37 636 aa34.03■■■■□ 3.04
UBE3A-222ENST00000630907 RBM42Q9BTD8 480 aaKnown RBP34.03■■■■□ 3.04
UBE3A-222ENST00000630907 MIS18AQ9NYP9 233 aa34.03■■■■□ 3.04
UBE3A-222ENST00000630907 CCNL1Q9UK58 526 aaPredicted RBP34.03■■■■□ 3.04
UBE3A-222ENST00000630907 LOC102724428A0A0B4J2F2 783 aa34.02■■■■□ 3.04
UBE3A-222ENST00000630907 SIK1P57059 783 aa34.02■■■■□ 3.04
UBE3A-222ENST00000630907 PTCD1O75127 700 aaKnown RBP34.01■■■■□ 3.03
UBE3A-222ENST00000630907 LY75O60449 1722 aa34■■■■□ 3.03
UBE3A-222ENST00000630907 BABAM1Q9NWV8 329 aa34■■■■□ 3.03
UBE3A-222ENST00000630907 PAPPAQ13219 1627 aa34■■■■□ 3.03
UBE3A-222ENST00000630907 KCNQ3O43525 872 aa33.99■■■■□ 3.03
UBE3A-222ENST00000630907 LAS1LQ9Y4W2 734 aaKnown RBP33.99■■■■□ 3.03
UBE3A-222ENST00000630907 LRRC4BQ9NT99 713 aa33.98■■■■□ 3.03
UBE3A-222ENST00000630907 TSPYL4Q9UJ04 414 aa33.98■■■■□ 3.03
UBE3A-222ENST00000630907 ATP6V1AP38606 617 aa33.97■■■■□ 3.03
UBE3A-222ENST00000630907 KCNQ4P56696 695 aa33.97■■■■□ 3.03
UBE3A-222ENST00000630907 CHL1O00533 1208 aa33.95■■■■□ 3.03
UBE3A-222ENST00000630907 WDR63Q8IWG1 891 aa33.95■■■■□ 3.03
UBE3A-222ENST00000630907 ZNF496Q96IT1 587 aaPredicted RBP33.95■■■■□ 3.03
UBE3A-222ENST00000630907 CFAP44Q96MT7 982 aa33.95■■■■□ 3.03
UBE3A-222ENST00000630907 SLC4A9Q96Q91 983 aa33.95■■■■□ 3.03
UBE3A-222ENST00000630907 KCPQ6ZWJ8 1503 aa33.94■■■■□ 3.02
UBE3A-222ENST00000630907 RREB1Q92766 1687 aa33.94■■■■□ 3.02
UBE3A-222ENST00000630907 FMNL2Q96PY5 1086 aa33.94■■■■□ 3.02
UBE3A-222ENST00000630907 IFT57Q9NWB7 429 aa33.94■■■■□ 3.02
UBE3A-222ENST00000630907 GNAI1P63096 354 aa33.93■■■■□ 3.02
UBE3A-222ENST00000630907 ZNF853P0CG23 659 aa33.92■■■■□ 3.02
UBE3A-222ENST00000630907 HMGB2P26583 209 aaKnown RBP33.92■■■■□ 3.02
UBE3A-222ENST00000630907 IL16Q14005 1332 aa33.92■■■■□ 3.02
UBE3A-222ENST00000630907 ITPK1Q13572 414 aa33.91■■■■□ 3.02
UBE3A-222ENST00000630907 VSIG10Q8N0Z9 540 aa33.91■■■■□ 3.02
UBE3A-222ENST00000630907 UBR2Q8IWV8 1755 aa33.9■■■■□ 3.02
UBE3A-222ENST00000630907 HEG1Q9ULI3 1381 aa33.89■■■■□ 3.02
UBE3A-222ENST00000630907 KDM3BQ7LBC6 1761 aa33.89■■■■□ 3.02
UBE3A-222ENST00000630907 ZNF521Q96K83 1311 aa33.88■■■■□ 3.01
UBE3A-222ENST00000630907 EIF4A1P60842 406 aaKnown RBP33.88■■■■□ 3.01
UBE3A-222ENST00000630907 HNRNPUQ00839 825 aaKnown RBP eCLIP33.88■■■■□ 3.01
UBE3A-222ENST00000630907 NUP188Q5SRE5 1749 aa33.87■■■■□ 3.01
UBE3A-222ENST00000630907 NBPF14Q5TI25 921 aa33.87■■■■□ 3.01
UBE3A-222ENST00000630907 MBIPQ9NS73 344 aa33.87■■■■□ 3.01
UBE3A-222ENST00000630907 DNAJC10Q8IXB1 793 aa33.86■■■■□ 3.01
UBE3A-222ENST00000630907 LINC00116Q8NCU8 138 aa33.86■■■■□ 3.01
UBE3A-222ENST00000630907 ZNF831Q5JPB2 1677 aa33.86■■■■□ 3.01
UBE3A-222ENST00000630907 TEX13AQ9BXU3 409 aaPredicted RBP33.84■■■■□ 3.01
UBE3A-222ENST00000630907 SNRPA1P09661 255 aaKnown RBP33.83■■■■□ 3.01
UBE3A-222ENST00000630907 STK32BQ9NY57 414 aa33.83■■■■□ 3.01
UBE3A-222ENST00000630907 C5P01031 1676 aa33.81■■■■□ 3
UBE3A-222ENST00000630907 ANO8Q9HCE9 1232 aaPredicted RBP33.81■■■■□ 3
UBE3A-222ENST00000630907 GOLGA2Q08379 1002 aa33.8■■■■□ 3
UBE3A-222ENST00000630907 AKT1S1Q96B36 256 aa33.8■■■■□ 3
UBE3A-222ENST00000630907 CICQ96RK0 1608 aaPredicted RBP33.79■■■■□ 3
UBE3A-222ENST00000630907 TJP1Q07157 1748 aa33.79■■■■□ 3
UBE3A-222ENST00000630907 GIGYF1O75420 1035 aaPredicted RBP33.79■■■■□ 3
UBE3A-222ENST00000630907 STARD3NLO95772 234 aa33.79■■■■□ 3
UBE3A-222ENST00000630907 SLC15A2Q16348 729 aa33.79■■■■□ 3
UBE3A-222ENST00000630907 ZNF827Q17R98 1081 aa33.79■■■■□ 3
UBE3A-222ENST00000630907 TSR2Q969E8 191 aaKnown RBP33.79■■■■□ 3
UBE3A-222ENST00000630907 SPINK5Q9NQ38 1064 aaPredicted RBP33.79■■■■□ 3
UBE3A-222ENST00000630907 TAF1LQ8IZX4 1826 aa33.79■■■■□ 3
UBE3A-222ENST00000630907 PRAMEF22A3QJZ6 481 aa33.78■■■■□ 3
UBE3A-222ENST00000630907 CYP19A1P11511 503 aaPredicted RBP33.78■■■■□ 3
UBE3A-222ENST00000630907 RC3H1Q5TC82 1133 aaKnown RBP33.77■■■■□ 3
UBE3A-222ENST00000630907 AK7Q96M32 723 aa33.77■■■■□ 3
UBE3A-222ENST00000630907 MYH16Q9H6N6 1097 aa33.77■■■■□ 3
UBE3A-222ENST00000630907 USP16Q9Y5T5 823 aa33.77■■■■□ 3
UBE3A-222ENST00000630907 CNTNAP4Q9C0A0 1308 aa33.77■■■■□ 3
UBE3A-222ENST00000630907 C4BP0C0L5 1744 aa33.76■■■□□ 2.99
UBE3A-222ENST00000630907 CRKLP46109 303 aaKnown RBP33.75■■■□□ 2.99
UBE3A-222ENST00000630907 KRT24Q2M2I5 525 aa33.75■■■□□ 2.99
UBE3A-222ENST00000630907 FANCIQ9NVI1 1328 aa33.75■■■□□ 2.99
UBE3A-222ENST00000630907 COL5A3P25940 1745 aaPredicted RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms