RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
CDC42EP4-209ENST00000630622 UPF1Q92900 1129 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDC42EP4-209ENST00000630622 TEFQ10587 303 aa21.84■■□□□ 1.09
CDC42EP4-209ENST00000630622 NGEFQ8N5V2 710 aa21.84■■□□□ 1.09
CDC42EP4-209ENST00000630622 RGPD3A6NKT7 1758 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP4-209ENST00000630622 RGPD4Q7Z3J3 1758 aa21.84■■□□□ 1.09
CDC42EP4-209ENST00000630622 LY75O60449 1722 aa21.83■■□□□ 1.09
CDC42EP4-209ENST00000630622 CCDC125Q86Z20 511 aa21.83■■□□□ 1.09
CDC42EP4-209ENST00000630622 WWC1Q8IX03 1113 aa21.82■■□□□ 1.08
CDC42EP4-209ENST00000630622 KDM3BQ7LBC6 1761 aa21.82■■□□□ 1.08
CDC42EP4-209ENST00000630622 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
CDC42EP4-209ENST00000630622 ATG3Q9NT62 314 aa21.81■■□□□ 1.08
CDC42EP4-209ENST00000630622 ASAP1Q9ULH1 1129 aa21.81■■□□□ 1.08
CDC42EP4-209ENST00000630622 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
CDC42EP4-209ENST00000630622 APBA3O96018 575 aa21.8■■□□□ 1.08
CDC42EP4-209ENST00000630622 TAF7Q15545 349 aaPredicted RBP21.8■■□□□ 1.08
CDC42EP4-209ENST00000630622 ZNF521Q96K83 1311 aa21.79■■□□□ 1.08
CDC42EP4-209ENST00000630622 PALLDQ8WX93 1383 aa21.78■■□□□ 1.08
CDC42EP4-209ENST00000630622 PLSCR1O15162 318 aa21.78■■□□□ 1.08
CDC42EP4-209ENST00000630622 SLC39A6Q13433 755 aa21.78■■□□□ 1.08
CDC42EP4-209ENST00000630622 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
CDC42EP4-209ENST00000630622 KCPQ6ZWJ8 1503 aa21.78■■□□□ 1.08
CDC42EP4-209ENST00000630622 BTBD11A6QL63 1104 aa21.77■■□□□ 1.08
CDC42EP4-209ENST00000630622 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
CDC42EP4-209ENST00000630622 BAG6P46379 1132 aa21.76■■□□□ 1.07
CDC42EP4-209ENST00000630622 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
CDC42EP4-209ENST00000630622 MIS18AQ9NYP9 233 aa21.76■■□□□ 1.07
CDC42EP4-209ENST00000630622 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 RREB1Q92766 1687 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 CHL1O00533 1208 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 KCNQ3O43525 872 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 ZNF790Q6PG37 636 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 DEFB132Q7Z7B7 95 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 WDR63Q8IWG1 891 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 CAMKK2Q96RR4 588 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 BABAM1Q9NWV8 329 aa21.75■■□□□ 1.07
CDC42EP4-209ENST00000630622 CICQ96RK0 1608 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP4-209ENST00000630622 HNRNPUQ00839 825 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDC42EP4-209ENST00000630622 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP4-209ENST00000630622 CFAP44Q96MT7 982 aa21.74■■□□□ 1.07
CDC42EP4-209ENST00000630622 IL16Q14005 1332 aa21.74■■□□□ 1.07
CDC42EP4-209ENST00000630622 PROM2Q8N271 834 aa21.73■■□□□ 1.07
CDC42EP4-209ENST00000630622 IFT57Q9NWB7 429 aa21.73■■□□□ 1.07
CDC42EP4-209ENST00000630622 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
CDC42EP4-209ENST00000630622 TSPYL4Q9UJ04 414 aa21.72■■□□□ 1.07
CDC42EP4-209ENST00000630622 TJP1Q07157 1748 aa21.72■■□□□ 1.07
CDC42EP4-209ENST00000630622 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 SIK1P57059 783 aa21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 GNAI1P63096 354 aa21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 EZH2Q15910 746 aaKnown RBP21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 LAS1LQ9Y4W2 734 aaKnown RBP21.71■■□□□ 1.07
CDC42EP4-209ENST00000630622 NUP188Q5SRE5 1749 aa21.7■■□□□ 1.06
CDC42EP4-209ENST00000630622 SOCS7O14512 581 aa21.7■■□□□ 1.06
CDC42EP4-209ENST00000630622 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
CDC42EP4-209ENST00000630622 TTC5Q8N0Z6 440 aa21.7■■□□□ 1.06
CDC42EP4-209ENST00000630622 ZNF496Q96IT1 587 aaPredicted RBP21.7■■□□□ 1.06
CDC42EP4-209ENST00000630622 SPINK5Q9NQ38 1064 aaPredicted RBP21.69■■□□□ 1.06
CDC42EP4-209ENST00000630622 MBIPQ9NS73 344 aa21.69■■□□□ 1.06
CDC42EP4-209ENST00000630622 LRRC4BQ9NT99 713 aa21.69■■□□□ 1.06
CDC42EP4-209ENST00000630622 C5P01031 1676 aa21.69■■□□□ 1.06
CDC42EP4-209ENST00000630622 COL5A3P25940 1745 aaPredicted RBP21.69■■□□□ 1.06
CDC42EP4-209ENST00000630622 KCNQ4P56696 695 aa21.68■■□□□ 1.06
CDC42EP4-209ENST00000630622 EIF4A1P60842 406 aaKnown RBP21.68■■□□□ 1.06
CDC42EP4-209ENST00000630622 SLC27A3Q5K4L6 730 aa21.68■■□□□ 1.06
CDC42EP4-209ENST00000630622 RBM42Q9BTD8 480 aaKnown RBP21.68■■□□□ 1.06
CDC42EP4-209ENST00000630622 HEG1Q9ULI3 1381 aa21.68■■□□□ 1.06
CDC42EP4-209ENST00000630622 FMNL2Q96PY5 1086 aa21.67■■□□□ 1.06
CDC42EP4-209ENST00000630622 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP4-209ENST00000630622 ZBED9Q6R2W3 1325 aa21.66■■□□□ 1.06
CDC42EP4-209ENST00000630622 GOLGA2Q08379 1002 aa21.66■■□□□ 1.06
CDC42EP4-209ENST00000630622 ITPK1Q13572 414 aa21.66■■□□□ 1.06
CDC42EP4-209ENST00000630622 VSIG10Q8N0Z9 540 aa21.66■■□□□ 1.06
CDC42EP4-209ENST00000630622 ATP6V1AP38606 617 aa21.65■■□□□ 1.06
CDC42EP4-209ENST00000630622 TSR2Q969E8 191 aaKnown RBP21.65■■□□□ 1.06
CDC42EP4-209ENST00000630622 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.06
CDC42EP4-209ENST00000630622 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.05
CDC42EP4-209ENST00000630622 CDCA7LQ96GN5 454 aa21.63■■□□□ 1.05
CDC42EP4-209ENST00000630622 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
CDC42EP4-209ENST00000630622 GIGYF1O75420 1035 aaPredicted RBP21.62■■□□□ 1.05
CDC42EP4-209ENST00000630622 SLFN5Q08AF3 891 aa21.62■■□□□ 1.05
CDC42EP4-209ENST00000630622 KRT24Q2M2I5 525 aa21.62■■□□□ 1.05
CDC42EP4-209ENST00000630622 DNAJC10Q8IXB1 793 aa21.62■■□□□ 1.05
CDC42EP4-209ENST00000630622 LINC00116Q8NCU8 138 aa21.62■■□□□ 1.05
CDC42EP4-209ENST00000630622 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
CDC42EP4-209ENST00000630622 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
CDC42EP4-209ENST00000630622 E9PSI1 815 aa21.61■■□□□ 1.05
CDC42EP4-209ENST00000630622 SNRPA1P09661 255 aaKnown RBP21.61■■□□□ 1.05
CDC42EP4-209ENST00000630622 MYH16Q9H6N6 1097 aa21.61■■□□□ 1.05
CDC42EP4-209ENST00000630622 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
CDC42EP4-209ENST00000630622 TEX13AQ9BXU3 409 aaPredicted RBP21.59■■□□□ 1.05
CDC42EP4-209ENST00000630622 CYP19A1P11511 503 aaPredicted RBP21.58■■□□□ 1.05
CDC42EP4-209ENST00000630622 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.05
CDC42EP4-209ENST00000630622 USP16Q9Y5T5 823 aa21.58■■□□□ 1.05
CDC42EP4-209ENST00000630622 TUBGCP6Q96RT7 1819 aa21.57■■□□□ 1.04
CDC42EP4-209ENST00000630622 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP4-209ENST00000630622 CNTNAP4Q9C0A0 1308 aa21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms