RNA–Protein interactions for RNA: ENST00000629318.1

KCNQ2-216, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 4

Gene KCNQ2, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-216ENST00000629318 NKX1-1Q15270 411 aaPredicted RBP20.28■□□□□ 0.84
KCNQ2-216ENST00000629318 GAS2L2Q8NHY3 880 aa20.28■□□□□ 0.84
KCNQ2-216ENST00000629318 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
KCNQ2-216ENST00000629318 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
KCNQ2-216ENST00000629318 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.84
KCNQ2-216ENST00000629318 PHACTR3Q96KR7 559 aa20.27■□□□□ 0.84
KCNQ2-216ENST00000629318 SRCAPQ6ZRS2 3230 aa20.27■□□□□ 0.84
KCNQ2-216ENST00000629318 TOGARAM1Q9Y4F4 1720 aa20.27■□□□□ 0.83
KCNQ2-216ENST00000629318 PHKG2P15735 406 aa20.25■□□□□ 0.83
KCNQ2-216ENST00000629318 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
KCNQ2-216ENST00000629318 ZNF428Q96B54 188 aa20.25■□□□□ 0.83
KCNQ2-216ENST00000629318 GNAI1P63096 354 aa20.24■□□□□ 0.83
KCNQ2-216ENST00000629318 SPINK5Q9NQ38 1064 aaPredicted RBP20.24■□□□□ 0.83
KCNQ2-216ENST00000629318 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
KCNQ2-216ENST00000629318 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
KCNQ2-216ENST00000629318 KAT6BQ8WYB5 2073 aa20.23■□□□□ 0.83
KCNQ2-216ENST00000629318 PSDA5PKW4 1024 aaPredicted RBP20.22■□□□□ 0.83
KCNQ2-216ENST00000629318 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
KCNQ2-216ENST00000629318 ANO8Q9HCE9 1232 aaPredicted RBP20.22■□□□□ 0.83
KCNQ2-216ENST00000629318 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
KCNQ2-216ENST00000629318 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
KCNQ2-216ENST00000629318 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
KCNQ2-216ENST00000629318 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
KCNQ2-216ENST00000629318 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
KCNQ2-216ENST00000629318 PAPPAQ13219 1627 aa20.2■□□□□ 0.82
KCNQ2-216ENST00000629318 PPP4R2Q9NY27 417 aa20.2■□□□□ 0.82
KCNQ2-216ENST00000629318 FANCIQ9NVI1 1328 aa20.2■□□□□ 0.82
KCNQ2-216ENST00000629318 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
KCNQ2-216ENST00000629318 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
KCNQ2-216ENST00000629318 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
KCNQ2-216ENST00000629318 LY75O60449 1722 aa20.19■□□□□ 0.82
KCNQ2-216ENST00000629318 ITGB4P16144 1822 aa20.18■□□□□ 0.82
KCNQ2-216ENST00000629318 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
KCNQ2-216ENST00000629318 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
KCNQ2-216ENST00000629318 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-216ENST00000629318 KDM6AO15550 1401 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-216ENST00000629318 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
KCNQ2-216ENST00000629318 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
KCNQ2-216ENST00000629318 PIGBQ92521 554 aa20.16■□□□□ 0.82
KCNQ2-216ENST00000629318 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
KCNQ2-216ENST00000629318 SLC27A3Q5K4L6 730 aa20.15■□□□□ 0.82
KCNQ2-216ENST00000629318 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
KCNQ2-216ENST00000629318 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
KCNQ2-216ENST00000629318 MS4A1P11836 297 aa20.14■□□□□ 0.81
KCNQ2-216ENST00000629318 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
KCNQ2-216ENST00000629318 GNAT3A8MTJ3 354 aa20.13■□□□□ 0.81
KCNQ2-216ENST00000629318 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
KCNQ2-216ENST00000629318 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
KCNQ2-216ENST00000629318 ERVV-2B6SEH9 535 aa20.12■□□□□ 0.81
KCNQ2-216ENST00000629318 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
KCNQ2-216ENST00000629318 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
KCNQ2-216ENST00000629318 SLC15A2Q16348 729 aa20.12■□□□□ 0.81
KCNQ2-216ENST00000629318 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 KCNQ4P56696 695 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 AAMPQ13685 434 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 AKAP4Q5JQC9 854 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 LRP5O75197 1615 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
KCNQ2-216ENST00000629318 CHL1O00533 1208 aa20.1■□□□□ 0.81
KCNQ2-216ENST00000629318 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
KCNQ2-216ENST00000629318 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
KCNQ2-216ENST00000629318 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
KCNQ2-216ENST00000629318 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
KCNQ2-216ENST00000629318 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
KCNQ2-216ENST00000629318 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
KCNQ2-216ENST00000629318 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
KCNQ2-216ENST00000629318 CCNL1Q9UK58 526 aaPredicted RBP20.09■□□□□ 0.81
KCNQ2-216ENST00000629318 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
KCNQ2-216ENST00000629318 PDGFDQ9GZP0 370 aaPredicted RBP20.08■□□□□ 0.81
KCNQ2-216ENST00000629318 ATG3Q9NT62 314 aa20.08■□□□□ 0.81
KCNQ2-216ENST00000629318 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
KCNQ2-216ENST00000629318 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.8
KCNQ2-216ENST00000629318 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
KCNQ2-216ENST00000629318 MRC1P22897 1456 aa20.07■□□□□ 0.8
KCNQ2-216ENST00000629318 CHMP4AQ9BY43 222 aa20.07■□□□□ 0.8
KCNQ2-216ENST00000629318 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
KCNQ2-216ENST00000629318 CANXP27824 592 aaKnown RBP20.06■□□□□ 0.8
KCNQ2-216ENST00000629318 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
KCNQ2-216ENST00000629318 IPO8O15397 1037 aaKnown RBP20.05■□□□□ 0.8
KCNQ2-216ENST00000629318 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
KCNQ2-216ENST00000629318 LGR6Q9HBX8 967 aa20.05■□□□□ 0.8
KCNQ2-216ENST00000629318 CEMIPQ8WUJ3 1361 aa20.05■□□□□ 0.8
KCNQ2-216ENST00000629318 CABP4P57796 275 aa20.04■□□□□ 0.8
KCNQ2-216ENST00000629318 MCM10Q7L590 875 aa20.04■□□□□ 0.8
KCNQ2-216ENST00000629318 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
KCNQ2-216ENST00000629318 QSER1Q2KHR3 1735 aa20.04■□□□□ 0.8
KCNQ2-216ENST00000629318 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
KCNQ2-216ENST00000629318 C5P01031 1676 aa20.03■□□□□ 0.8
KCNQ2-216ENST00000629318 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
KCNQ2-216ENST00000629318 BCAR3O75815 825 aa20.03■□□□□ 0.8
KCNQ2-216ENST00000629318 SIK1P57059 783 aa20.03■□□□□ 0.8
KCNQ2-216ENST00000629318 NFATC2IPQ8NCF5 419 aa20.03■□□□□ 0.8
KCNQ2-216ENST00000629318 TUBGCP6Q96RT7 1819 aa20.02■□□□□ 0.8
KCNQ2-216ENST00000629318 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
KCNQ2-216ENST00000629318 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
KCNQ2-216ENST00000629318 ZKSCAN2Q63HK3 967 aa20.02■□□□□ 0.8
KCNQ2-216ENST00000629318 SLC4A9Q96Q91 983 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms