RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SLC27A3Q5K4L6 730 aa11.79□□□□□ -0.52
CHD2-216ENST00000629104 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
CHD2-216ENST00000629104 LGR6Q9HBX8 967 aa11.79□□□□□ -0.52
CHD2-216ENST00000629104 NEFMP07197 916 aa11.78□□□□□ -0.52
CHD2-216ENST00000629104 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD2-216ENST00000629104 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
CHD2-216ENST00000629104 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
CHD2-216ENST00000629104 CCDC184Q52MB2 194 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 SLC52A2Q9HAB3 445 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 ATG3Q9NT62 314 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 ASAP1Q9ULH1 1129 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 MAPK8IP3Q9UPT6 1336 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.53
CHD2-216ENST00000629104 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
CHD2-216ENST00000629104 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
CHD2-216ENST00000629104 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
CHD2-216ENST00000629104 ADAMTS8Q9UP79 889 aa11.76□□□□□ -0.53
CHD2-216ENST00000629104 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
CHD2-216ENST00000629104 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
CHD2-216ENST00000629104 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
CHD2-216ENST00000629104 UBR2Q8IWV8 1755 aa11.75□□□□□ -0.53
CHD2-216ENST00000629104 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
CHD2-216ENST00000629104 KCNQ4P56696 695 aa11.75□□□□□ -0.53
CHD2-216ENST00000629104 R3HDM1Q15032 1099 aaKnown RBP11.75□□□□□ -0.53
CHD2-216ENST00000629104 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
CHD2-216ENST00000629104 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
CHD2-216ENST00000629104 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
CHD2-216ENST00000629104 HTATSF1O43719 755 aaKnown RBP11.74□□□□□ -0.53
CHD2-216ENST00000629104 SIK1P57059 783 aa11.74□□□□□ -0.53
CHD2-216ENST00000629104 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
CHD2-216ENST00000629104 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
CHD2-216ENST00000629104 MRS2Q9HD23 443 aa11.74□□□□□ -0.53
CHD2-216ENST00000629104 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
CHD2-216ENST00000629104 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
CHD2-216ENST00000629104 TJP1Q07157 1748 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 TEFQ10587 303 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 SLC15A2Q16348 729 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 MCM10Q7L590 875 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 STK32BQ9NY57 414 aa11.73□□□□□ -0.53
CHD2-216ENST00000629104 KCPQ6ZWJ8 1503 aa11.72□□□□□ -0.53
CHD2-216ENST00000629104 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
CHD2-216ENST00000629104 ZNF827Q17R98 1081 aa11.72□□□□□ -0.53
CHD2-216ENST00000629104 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
CHD2-216ENST00000629104 UBR3Q6ZT12 1888 aa11.72□□□□□ -0.53
CHD2-216ENST00000629104 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
CHD2-216ENST00000629104 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
CHD2-216ENST00000629104 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.53
CHD2-216ENST00000629104 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
CHD2-216ENST00000629104 ITPK1Q13572 414 aa11.71□□□□□ -0.53
CHD2-216ENST00000629104 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.53
CHD2-216ENST00000629104 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
CHD2-216ENST00000629104 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
CHD2-216ENST00000629104 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
CHD2-216ENST00000629104 RIPK4P57078 832 aa11.7□□□□□ -0.54
CHD2-216ENST00000629104 MYH14Q7Z406 1995 aaKnown RBP11.69□□□□□ -0.54
CHD2-216ENST00000629104 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
CHD2-216ENST00000629104 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
CHD2-216ENST00000629104 LINC00116Q8NCU8 138 aa11.69□□□□□ -0.54
CHD2-216ENST00000629104 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
CHD2-216ENST00000629104 LRP5O75197 1615 aa11.68□□□□□ -0.54
CHD2-216ENST00000629104 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
CHD2-216ENST00000629104 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
CHD2-216ENST00000629104 THUMPD2Q9BTF0 503 aaKnown RBP11.68□□□□□ -0.54
CHD2-216ENST00000629104 PDGFDQ9GZP0 370 aaPredicted RBP11.68□□□□□ -0.54
CHD2-216ENST00000629104 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
CHD2-216ENST00000629104 PNPLA7Q6ZV29 1317 aa11.67□□□□□ -0.54
CHD2-216ENST00000629104 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
CHD2-216ENST00000629104 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
CHD2-216ENST00000629104 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
CHD2-216ENST00000629104 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
CHD2-216ENST00000629104 AK7Q96M32 723 aa11.67□□□□□ -0.54
CHD2-216ENST00000629104 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
CHD2-216ENST00000629104 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
CHD2-216ENST00000629104 APAF1O14727 1248 aa11.66□□□□□ -0.54
CHD2-216ENST00000629104 KCNQ3O43525 872 aa11.66□□□□□ -0.54
CHD2-216ENST00000629104 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
CHD2-216ENST00000629104 COL24A1Q17RW2 1714 aa11.66□□□□□ -0.54
CHD2-216ENST00000629104 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
CHD2-216ENST00000629104 RC3H1Q5TC82 1133 aaKnown RBP11.65□□□□□ -0.54
CHD2-216ENST00000629104 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
CHD2-216ENST00000629104 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
CHD2-216ENST00000629104 C4AP0C0L4 1744 aa11.65□□□□□ -0.54
CHD2-216ENST00000629104 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 CCER2I3L3R5 266 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 GNPATO15228 680 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 SSFA2P28290 1259 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 CRKLP46109 303 aaKnown RBP11.64□□□□□ -0.55
CHD2-216ENST00000629104 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
CHD2-216ENST00000629104 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 FLAD1Q8NFF5 587 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
CHD2-216ENST00000629104 PHF14O94880 888 aa11.63□□□□□ -0.55
CHD2-216ENST00000629104 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
CHD2-216ENST00000629104 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms