RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-249ENST00000628810 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
SOX2-OT-249ENST00000628810 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-249ENST00000628810 AKAP4Q5JQC9 854 aa13.01□□□□□ -0.33
SOX2-OT-249ENST00000628810 ZNF530Q6P9A1 599 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-249ENST00000628810 IFNL2Q8IZJ0 200 aa13.01□□□□□ -0.33
SOX2-OT-249ENST00000628810 DOT1LQ8TEK3 1739 aa13.01□□□□□ -0.33
SOX2-OT-249ENST00000628810 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
SOX2-OT-249ENST00000628810 NHSQ6T4R5 1651 aa13□□□□□ -0.33
SOX2-OT-249ENST00000628810 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
SOX2-OT-249ENST00000628810 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
SOX2-OT-249ENST00000628810 NGEFQ8N5V2 710 aa13□□□□□ -0.33
SOX2-OT-249ENST00000628810 MARCH10Q8NA82 808 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-249ENST00000628810 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
SOX2-OT-249ENST00000628810 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 A0A0G2JS52 829 aa12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 APAF1O14727 1248 aa12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 MYT1Q01538 1121 aa12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
SOX2-OT-249ENST00000628810 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
SOX2-OT-249ENST00000628810 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
SOX2-OT-249ENST00000628810 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
SOX2-OT-249ENST00000628810 DCAF5Q96JK2 942 aa12.98□□□□□ -0.33
SOX2-OT-249ENST00000628810 SBF2Q86WG5 1849 aa12.97□□□□□ -0.33
SOX2-OT-249ENST00000628810 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
SOX2-OT-249ENST00000628810 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-249ENST00000628810 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
SOX2-OT-249ENST00000628810 RIPK4P57078 832 aa12.96□□□□□ -0.33
SOX2-OT-249ENST00000628810 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
SOX2-OT-249ENST00000628810 ITGB4P16144 1822 aa12.95□□□□□ -0.34
SOX2-OT-249ENST00000628810 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-249ENST00000628810 EP400Q96L91 3159 aa12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 TNS1Q9HBL0 1735 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
SOX2-OT-249ENST00000628810 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-249ENST00000628810 KDM3BQ7LBC6 1761 aa12.93□□□□□ -0.34
SOX2-OT-249ENST00000628810 MCM10Q7L590 875 aa12.92□□□□□ -0.34
SOX2-OT-249ENST00000628810 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
SOX2-OT-249ENST00000628810 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
SOX2-OT-249ENST00000628810 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
SOX2-OT-249ENST00000628810 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
SOX2-OT-249ENST00000628810 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
SOX2-OT-249ENST00000628810 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
SOX2-OT-249ENST00000628810 BTAF1O14981 1849 aa12.91□□□□□ -0.34
SOX2-OT-249ENST00000628810 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
SOX2-OT-249ENST00000628810 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
SOX2-OT-249ENST00000628810 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
SOX2-OT-249ENST00000628810 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
SOX2-OT-249ENST00000628810 IL16Q14005 1332 aa12.9□□□□□ -0.34
SOX2-OT-249ENST00000628810 ZBED9Q6R2W3 1325 aa12.9□□□□□ -0.34
SOX2-OT-249ENST00000628810 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
SOX2-OT-249ENST00000628810 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-249ENST00000628810 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 TEFQ10587 303 aa12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
SOX2-OT-249ENST00000628810 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
SOX2-OT-249ENST00000628810 LY75O60449 1722 aa12.88□□□□□ -0.35
SOX2-OT-249ENST00000628810 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
SOX2-OT-249ENST00000628810 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-249ENST00000628810 CABP4P57796 275 aa12.88□□□□□ -0.35
SOX2-OT-249ENST00000628810 KCNQ2O43526 872 aa12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 PIGBQ92521 554 aa12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 IFT57Q9NWB7 429 aa12.87□□□□□ -0.35
SOX2-OT-249ENST00000628810 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
SOX2-OT-249ENST00000628810 CHL1O00533 1208 aa12.86□□□□□ -0.35
SOX2-OT-249ENST00000628810 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-249ENST00000628810 GNAI1P63096 354 aa12.85□□□□□ -0.35
SOX2-OT-249ENST00000628810 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
SOX2-OT-249ENST00000628810 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-249ENST00000628810 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
SOX2-OT-249ENST00000628810 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
SOX2-OT-249ENST00000628810 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-249ENST00000628810 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
SOX2-OT-249ENST00000628810 TRIM37O94972 964 aa12.84□□□□□ -0.35
SOX2-OT-249ENST00000628810 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
SOX2-OT-249ENST00000628810 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
SOX2-OT-249ENST00000628810 TJP1Q07157 1748 aa12.84□□□□□ -0.35
SOX2-OT-249ENST00000628810 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
SOX2-OT-249ENST00000628810 RREB1Q92766 1687 aa12.83□□□□□ -0.35
SOX2-OT-249ENST00000628810 PALLDQ8WX93 1383 aa12.83□□□□□ -0.36
SOX2-OT-249ENST00000628810 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.36
SOX2-OT-249ENST00000628810 E9PSI1 815 aa12.83□□□□□ -0.36
SOX2-OT-249ENST00000628810 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms