RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 USP21Q9UK80 565 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
FOXCUT-201ENST00000628509 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
FOXCUT-201ENST00000628509 DDB1Q16531 1140 aa13.01□□□□□ -0.33
FOXCUT-201ENST00000628509 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
FOXCUT-201ENST00000628509 TTC5Q8N0Z6 440 aa13.01□□□□□ -0.33
FOXCUT-201ENST00000628509 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
FOXCUT-201ENST00000628509 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
FOXCUT-201ENST00000628509 CABP4P57796 275 aa13□□□□□ -0.33
FOXCUT-201ENST00000628509 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
FOXCUT-201ENST00000628509 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
FOXCUT-201ENST00000628509 IL17REQ8NFR9 667 aa13□□□□□ -0.33
FOXCUT-201ENST00000628509 FBXO41Q8TF61 875 aa13□□□□□ -0.33
FOXCUT-201ENST00000628509 TSR2Q969E8 191 aaKnown RBP13□□□□□ -0.33
FOXCUT-201ENST00000628509 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
FOXCUT-201ENST00000628509 STK31Q9BXU1 1019 aa13□□□□□ -0.33
FOXCUT-201ENST00000628509 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 AAMPQ13685 434 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
FOXCUT-201ENST00000628509 TNS2Q63HR2 1409 aa12.98□□□□□ -0.33
FOXCUT-201ENST00000628509 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
FOXCUT-201ENST00000628509 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
FOXCUT-201ENST00000628509 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
FOXCUT-201ENST00000628509 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
FOXCUT-201ENST00000628509 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
FOXCUT-201ENST00000628509 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
FOXCUT-201ENST00000628509 A0A0G2JS52 829 aa12.97□□□□□ -0.33
FOXCUT-201ENST00000628509 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
FOXCUT-201ENST00000628509 MYT1Q01538 1121 aa12.97□□□□□ -0.33
FOXCUT-201ENST00000628509 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
FOXCUT-201ENST00000628509 LRP6O75581 1613 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 AFF2P51816 1311 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 CYP27B1O15528 508 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 FKBP8Q14318 412 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
FOXCUT-201ENST00000628509 MRC1P22897 1456 aa12.96□□□□□ -0.34
FOXCUT-201ENST00000628509 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.34
FOXCUT-201ENST00000628509 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
FOXCUT-201ENST00000628509 VAMP4O75379 141 aa12.95□□□□□ -0.34
FOXCUT-201ENST00000628509 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
FOXCUT-201ENST00000628509 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
FOXCUT-201ENST00000628509 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
FOXCUT-201ENST00000628509 LGR6Q9HBX8 967 aa12.95□□□□□ -0.34
FOXCUT-201ENST00000628509 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
FOXCUT-201ENST00000628509 GJD4Q96KN9 370 aaPredicted RBP12.94□□□□□ -0.34
FOXCUT-201ENST00000628509 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
FOXCUT-201ENST00000628509 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
FOXCUT-201ENST00000628509 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
FOXCUT-201ENST00000628509 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
FOXCUT-201ENST00000628509 PTPRCP08575 1304 aa12.93□□□□□ -0.34
FOXCUT-201ENST00000628509 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
FOXCUT-201ENST00000628509 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
FOXCUT-201ENST00000628509 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
FOXCUT-201ENST00000628509 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
FOXCUT-201ENST00000628509 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
FOXCUT-201ENST00000628509 ATRNO75882 1429 aa12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 HDGFL1Q5TGJ6 251 aa12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 SSH1Q8WYL5 1049 aa12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
FOXCUT-201ENST00000628509 BCAR3O75815 825 aa12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 PPP4R2Q9NY27 417 aa12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 MIS18AQ9NYP9 233 aa12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 DBF4Q9UBU7 674 aaPredicted RBP12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
FOXCUT-201ENST00000628509 ERBB4Q15303 1308 aa12.89□□□□□ -0.35
FOXCUT-201ENST00000628509 DDX58O95786 925 aaKnown RBP12.89□□□□□ -0.35
FOXCUT-201ENST00000628509 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
FOXCUT-201ENST00000628509 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
FOXCUT-201ENST00000628509 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
FOXCUT-201ENST00000628509 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
FOXCUT-201ENST00000628509 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
FOXCUT-201ENST00000628509 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
FOXCUT-201ENST00000628509 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
FOXCUT-201ENST00000628509 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
FOXCUT-201ENST00000628509 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
FOXCUT-201ENST00000628509 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
FOXCUT-201ENST00000628509 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
FOXCUT-201ENST00000628509 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
FOXCUT-201ENST00000628509 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms