RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
MECP2-217ENST00000628176 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
MECP2-217ENST00000628176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.19■□□□□ 0.5
MECP2-217ENST00000628176 PCDH11XQ9BZA7 1347 aa18.19■□□□□ 0.5
MECP2-217ENST00000628176 PCDH11YQ9BZA8 1340 aa18.19■□□□□ 0.5
MECP2-217ENST00000628176 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
MECP2-217ENST00000628176 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
MECP2-217ENST00000628176 IFNL2Q8IZJ0 200 aa18.18■□□□□ 0.5
MECP2-217ENST00000628176 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
MECP2-217ENST00000628176 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
MECP2-217ENST00000628176 GNAT3A8MTJ3 354 aa18.17■□□□□ 0.5
MECP2-217ENST00000628176 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
MECP2-217ENST00000628176 AKAP4Q5JQC9 854 aa18.17■□□□□ 0.5
MECP2-217ENST00000628176 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
MECP2-217ENST00000628176 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
MECP2-217ENST00000628176 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
MECP2-217ENST00000628176 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
MECP2-217ENST00000628176 AAMPQ13685 434 aa18.15■□□□□ 0.5
MECP2-217ENST00000628176 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
MECP2-217ENST00000628176 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
MECP2-217ENST00000628176 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
MECP2-217ENST00000628176 RTL5Q5HYW3 569 aaPredicted RBP18.15■□□□□ 0.5
MECP2-217ENST00000628176 PTF1AQ7RTS3 328 aa18.15■□□□□ 0.5
MECP2-217ENST00000628176 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
MECP2-217ENST00000628176 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
MECP2-217ENST00000628176 SCN11AQ9UI33 1791 aa18.13■□□□□ 0.49
MECP2-217ENST00000628176 WWC1Q8IX03 1113 aa18.13■□□□□ 0.49
MECP2-217ENST00000628176 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
MECP2-217ENST00000628176 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
MECP2-217ENST00000628176 KCNQ2O43526 872 aa18.12■□□□□ 0.49
MECP2-217ENST00000628176 NKX1-1Q15270 411 aaPredicted RBP18.12■□□□□ 0.49
MECP2-217ENST00000628176 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
MECP2-217ENST00000628176 FAM161AQ3B820 660 aa18.11■□□□□ 0.49
MECP2-217ENST00000628176 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
MECP2-217ENST00000628176 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
MECP2-217ENST00000628176 ITGB4P16144 1822 aa18.1■□□□□ 0.49
MECP2-217ENST00000628176 PRIM1P49642 420 aaKnown RBP18.1■□□□□ 0.49
MECP2-217ENST00000628176 NFATC2IPQ8NCF5 419 aa18.1■□□□□ 0.49
MECP2-217ENST00000628176 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
MECP2-217ENST00000628176 NBR1Q14596 966 aa18.09■□□□□ 0.49
MECP2-217ENST00000628176 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
MECP2-217ENST00000628176 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
MECP2-217ENST00000628176 HTATSF1O43719 755 aaKnown RBP18.09■□□□□ 0.49
MECP2-217ENST00000628176 CALD1Q05682 793 aaKnown RBP18.09■□□□□ 0.49
MECP2-217ENST00000628176 SBF2Q86WG5 1849 aa18.08■□□□□ 0.49
MECP2-217ENST00000628176 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.49
MECP2-217ENST00000628176 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.48
MECP2-217ENST00000628176 HSP90AB1P08238 724 aaKnown RBP18.07■□□□□ 0.48
MECP2-217ENST00000628176 CABP4P57796 275 aa18.06■□□□□ 0.48
MECP2-217ENST00000628176 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
MECP2-217ENST00000628176 PIGBQ92521 554 aa18.06■□□□□ 0.48
MECP2-217ENST00000628176 KCNQ3O43525 872 aa18.06■□□□□ 0.48
MECP2-217ENST00000628176 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
MECP2-217ENST00000628176 SLC52A2Q9HAB3 445 aa18.06■□□□□ 0.48
MECP2-217ENST00000628176 SIPA1L3O60292 1781 aaPredicted RBP18.05■□□□□ 0.48
MECP2-217ENST00000628176 TEFQ10587 303 aa18.05■□□□□ 0.48
MECP2-217ENST00000628176 C8orf34Q49A92 452 aa18.05■□□□□ 0.48
MECP2-217ENST00000628176 IL16Q14005 1332 aa18.04■□□□□ 0.48
MECP2-217ENST00000628176 TRIM37O94972 964 aa18.04■□□□□ 0.48
MECP2-217ENST00000628176 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
MECP2-217ENST00000628176 ERVV-2B6SEH9 535 aa18.03■□□□□ 0.48
MECP2-217ENST00000628176 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
MECP2-217ENST00000628176 TMOD3Q9NYL9 352 aa18.03■□□□□ 0.48
MECP2-217ENST00000628176 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
MECP2-217ENST00000628176 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
MECP2-217ENST00000628176 BTBD11A6QL63 1104 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 MYH16Q9H6N6 1097 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 MRC1P22897 1456 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 BCL9O00512 1426 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 BTAF1O14981 1849 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 BCAR3O75815 825 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 KRT24Q2M2I5 525 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 MBIPQ9NS73 344 aa18.01■□□□□ 0.47
MECP2-217ENST00000628176 NHSQ6T4R5 1651 aa18■□□□□ 0.47
MECP2-217ENST00000628176 ZNF853P0CG23 659 aa18■□□□□ 0.47
MECP2-217ENST00000628176 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
MECP2-217ENST00000628176 CHL1O00533 1208 aa17.99■□□□□ 0.47
MECP2-217ENST00000628176 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
MECP2-217ENST00000628176 GNAI1P63096 354 aa17.99■□□□□ 0.47
MECP2-217ENST00000628176 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
MECP2-217ENST00000628176 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
MECP2-217ENST00000628176 IFT57Q9NWB7 429 aa17.99■□□□□ 0.47
MECP2-217ENST00000628176 CLUAP1Q96AJ1 413 aa17.98■□□□□ 0.47
MECP2-217ENST00000628176 KCNQ4P56696 695 aa17.98■□□□□ 0.47
MECP2-217ENST00000628176 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
MECP2-217ENST00000628176 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
MECP2-217ENST00000628176 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
MECP2-217ENST00000628176 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
MECP2-217ENST00000628176 RARSP54136 660 aaKnown RBP17.96■□□□□ 0.47
MECP2-217ENST00000628176 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
MECP2-217ENST00000628176 BCL11BQ9C0K0 894 aaPredicted RBP17.96■□□□□ 0.47
MECP2-217ENST00000628176 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
MECP2-217ENST00000628176 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
MECP2-217ENST00000628176 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
MECP2-217ENST00000628176 TSPYL6Q8N831 410 aa17.94■□□□□ 0.46
MECP2-217ENST00000628176 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
MECP2-217ENST00000628176 SLC4A9Q96Q91 983 aa17.94■□□□□ 0.46
MECP2-217ENST00000628176 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
MECP2-217ENST00000628176 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
MECP2-217ENST00000628176 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms