RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 UPF1Q92900 1129 aaKnown RBP eCLIP24.71■■□□□ 1.55
MECP2-216ENST00000627864 APBA3O96018 575 aa24.7■■□□□ 1.54
MECP2-216ENST00000627864 CCDC125Q86Z20 511 aa24.7■■□□□ 1.54
MECP2-216ENST00000627864 CCDC27Q2M243 656 aa24.67■■□□□ 1.54
MECP2-216ENST00000627864 NCBP3Q53F19 620 aaKnown RBP24.67■■□□□ 1.54
MECP2-216ENST00000627864 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
MECP2-216ENST00000627864 NGEFQ8N5V2 710 aa24.66■■□□□ 1.54
MECP2-216ENST00000627864 ASAP1Q9ULH1 1129 aa24.66■■□□□ 1.54
MECP2-216ENST00000627864 EP400Q96L91 3159 aa24.65■■□□□ 1.54
MECP2-216ENST00000627864 LY75O60449 1722 aa24.65■■□□□ 1.54
MECP2-216ENST00000627864 WWC1Q8IX03 1113 aa24.65■■□□□ 1.54
MECP2-216ENST00000627864 PAPPAQ13219 1627 aa24.64■■□□□ 1.54
MECP2-216ENST00000627864 BTBD11A6QL63 1104 aa24.64■■□□□ 1.54
MECP2-216ENST00000627864 BAG6P46379 1132 aa24.64■■□□□ 1.54
MECP2-216ENST00000627864 ATG3Q9NT62 314 aa24.64■■□□□ 1.54
MECP2-216ENST00000627864 KDM3BQ7LBC6 1761 aa24.63■■□□□ 1.53
MECP2-216ENST00000627864 SLC39A6Q13433 755 aa24.63■■□□□ 1.53
MECP2-216ENST00000627864 SMARCC1Q92922 1105 aaPredicted RBP24.63■■□□□ 1.53
MECP2-216ENST00000627864 MIS18AQ9NYP9 233 aa24.63■■□□□ 1.53
MECP2-216ENST00000627864 LAS1LQ9Y4W2 734 aaKnown RBP24.63■■□□□ 1.53
MECP2-216ENST00000627864 HNRNPUQ00839 825 aaKnown RBP eCLIP24.62■■□□□ 1.53
MECP2-216ENST00000627864 CALD1Q05682 793 aaKnown RBP24.62■■□□□ 1.53
MECP2-216ENST00000627864 DEFB132Q7Z7B7 95 aa24.62■■□□□ 1.53
MECP2-216ENST00000627864 RGPD3A6NKT7 1758 aaPredicted RBP24.62■■□□□ 1.53
MECP2-216ENST00000627864 RGPD4Q7Z3J3 1758 aa24.62■■□□□ 1.53
MECP2-216ENST00000627864 PLSCR1O15162 318 aa24.61■■□□□ 1.53
MECP2-216ENST00000627864 EN1Q05925 392 aaPredicted RBP24.61■■□□□ 1.53
MECP2-216ENST00000627864 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
MECP2-216ENST00000627864 UBR2Q8IWV8 1755 aa24.61■■□□□ 1.53
MECP2-216ENST00000627864 TTC5Q8N0Z6 440 aa24.59■■□□□ 1.53
MECP2-216ENST00000627864 RBM42Q9BTD8 480 aaKnown RBP24.59■■□□□ 1.53
MECP2-216ENST00000627864 KCNQ3O43525 872 aa24.58■■□□□ 1.53
MECP2-216ENST00000627864 PTCD1O75127 700 aaKnown RBP24.58■■□□□ 1.53
MECP2-216ENST00000627864 ZNF790Q6PG37 636 aa24.58■■□□□ 1.53
MECP2-216ENST00000627864 WDR63Q8IWG1 891 aa24.58■■□□□ 1.53
MECP2-216ENST00000627864 EZH2Q15910 746 aaKnown RBP24.57■■□□□ 1.52
MECP2-216ENST00000627864 CAMKK2Q96RR4 588 aa24.57■■□□□ 1.52
MECP2-216ENST00000627864 TSPYL4Q9UJ04 414 aa24.57■■□□□ 1.52
MECP2-216ENST00000627864 TAF1LQ8IZX4 1826 aa24.56■■□□□ 1.52
MECP2-216ENST00000627864 CHL1O00533 1208 aa24.56■■□□□ 1.52
MECP2-216ENST00000627864 GNAI1P63096 354 aa24.56■■□□□ 1.52
MECP2-216ENST00000627864 CFAP44Q96MT7 982 aa24.56■■□□□ 1.52
MECP2-216ENST00000627864 SOCS7O14512 581 aa24.55■■□□□ 1.52
MECP2-216ENST00000627864 TXNRD1Q16881 649 aa24.55■■□□□ 1.52
MECP2-216ENST00000627864 IFT57Q9NWB7 429 aa24.55■■□□□ 1.52
MECP2-216ENST00000627864 BABAM1Q9NWV8 329 aa24.55■■□□□ 1.52
MECP2-216ENST00000627864 RREB1Q92766 1687 aa24.54■■□□□ 1.52
MECP2-216ENST00000627864 ZNF853P0CG23 659 aa24.54■■□□□ 1.52
MECP2-216ENST00000627864 KCPQ6ZWJ8 1503 aa24.54■■□□□ 1.52
MECP2-216ENST00000627864 IL16Q14005 1332 aa24.54■■□□□ 1.52
MECP2-216ENST00000627864 ZNF521Q96K83 1311 aa24.54■■□□□ 1.52
MECP2-216ENST00000627864 LOC102724428A0A0B4J2F2 783 aa24.53■■□□□ 1.52
MECP2-216ENST00000627864 KCNQ4P56696 695 aa24.53■■□□□ 1.52
MECP2-216ENST00000627864 SIK1P57059 783 aa24.53■■□□□ 1.52
MECP2-216ENST00000627864 PROM2Q8N271 834 aa24.53■■□□□ 1.52
MECP2-216ENST00000627864 ZNF496Q96IT1 587 aaPredicted RBP24.53■■□□□ 1.52
MECP2-216ENST00000627864 CCNL1Q9UK58 526 aaPredicted RBP24.53■■□□□ 1.52
MECP2-216ENST00000627864 ZNF831Q5JPB2 1677 aa24.53■■□□□ 1.52
MECP2-216ENST00000627864 FMNL2Q96PY5 1086 aa24.52■■□□□ 1.52
MECP2-216ENST00000627864 MBIPQ9NS73 344 aa24.52■■□□□ 1.52
MECP2-216ENST00000627864 ATP6V1AP38606 617 aa24.51■■□□□ 1.51
MECP2-216ENST00000627864 TJP1Q07157 1748 aa24.51■■□□□ 1.51
MECP2-216ENST00000627864 C5P01031 1676 aa24.5■■□□□ 1.51
MECP2-216ENST00000627864 NUP188Q5SRE5 1749 aa24.5■■□□□ 1.51
MECP2-216ENST00000627864 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
MECP2-216ENST00000627864 SLC27A3Q5K4L6 730 aa24.5■■□□□ 1.51
MECP2-216ENST00000627864 SLC4A9Q96Q91 983 aa24.5■■□□□ 1.51
MECP2-216ENST00000627864 LRRC4BQ9NT99 713 aa24.5■■□□□ 1.51
MECP2-216ENST00000627864 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
MECP2-216ENST00000627864 SPINK5Q9NQ38 1064 aaPredicted RBP24.49■■□□□ 1.51
MECP2-216ENST00000627864 TSR2Q969E8 191 aaKnown RBP24.48■■□□□ 1.51
MECP2-216ENST00000627864 HEG1Q9ULI3 1381 aa24.48■■□□□ 1.51
MECP2-216ENST00000627864 COL5A3P25940 1745 aaPredicted RBP24.47■■□□□ 1.51
MECP2-216ENST00000627864 ITPK1Q13572 414 aa24.47■■□□□ 1.51
MECP2-216ENST00000627864 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
MECP2-216ENST00000627864 VSIG10Q8N0Z9 540 aa24.46■■□□□ 1.51
MECP2-216ENST00000627864 CICQ96RK0 1608 aaPredicted RBP24.46■■□□□ 1.51
MECP2-216ENST00000627864 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.5
MECP2-216ENST00000627864 CDCA7LQ96GN5 454 aa24.45■■□□□ 1.5
MECP2-216ENST00000627864 MYH16Q9H6N6 1097 aa24.45■■□□□ 1.5
MECP2-216ENST00000627864 MYH14Q7Z406 1995 aaKnown RBP24.45■■□□□ 1.5
MECP2-216ENST00000627864 ZBED9Q6R2W3 1325 aa24.44■■□□□ 1.5
MECP2-216ENST00000627864 SNRPA1P09661 255 aaKnown RBP24.44■■□□□ 1.5
MECP2-216ENST00000627864 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
MECP2-216ENST00000627864 FANCIQ9NVI1 1328 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 PRAMEF22A3QJZ6 481 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 E9PSI1 815 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 SLFN5Q08AF3 891 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 KRT24Q2M2I5 525 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 LINC00116Q8NCU8 138 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 C4BP0C0L5 1744 aa24.43■■□□□ 1.5
MECP2-216ENST00000627864 GIGYF1O75420 1035 aaPredicted RBP24.42■■□□□ 1.5
MECP2-216ENST00000627864 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
MECP2-216ENST00000627864 USP16Q9Y5T5 823 aa24.41■■□□□ 1.5
MECP2-216ENST00000627864 HMGB2P26583 209 aaKnown RBP24.4■■□□□ 1.5
MECP2-216ENST00000627864 ELL2O00472 640 aaPredicted RBP24.39■■□□□ 1.49
MECP2-216ENST00000627864 CYP19A1P11511 503 aaPredicted RBP24.39■■□□□ 1.49
MECP2-216ENST00000627864 DUSP27Q5VZP5 1158 aa24.39■■□□□ 1.49
MECP2-216ENST00000627864 C8orf58Q8NAV2 365 aa24.39■■□□□ 1.49
MECP2-216ENST00000627864 TUBGCP6Q96RT7 1819 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms