RNA–Protein interactions for RNA: ENST00000626400.1

AP003500.1-201, humanhuman

TSL 4 BASIC

Gene AP003500.1, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003500.1-201ENST00000626400 TRIM37O94972 964 aa12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 CABP4P57796 275 aa12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 MIER1Q8N108 512 aa12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 KDM3BQ7LBC6 1761 aa12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
AP003500.1-201ENST00000626400 RIPK4P57078 832 aa12.59□□□□□ -0.39
AP003500.1-201ENST00000626400 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
AP003500.1-201ENST00000626400 QSER1Q2KHR3 1735 aa12.58□□□□□ -0.4
AP003500.1-201ENST00000626400 IL17REQ8NFR9 667 aa12.58□□□□□ -0.4
AP003500.1-201ENST00000626400 APAF1O14727 1248 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 APBA3O96018 575 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 PIGBQ92521 554 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 SYTL4Q96C24 671 aaPredicted RBP12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 C5P01031 1676 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 IL16Q14005 1332 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
AP003500.1-201ENST00000626400 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 COL5A3P25940 1745 aaPredicted RBP12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
AP003500.1-201ENST00000626400 KCNQ2O43526 872 aa12.55□□□□□ -0.4
AP003500.1-201ENST00000626400 ACSBG1Q96GR2 724 aa12.55□□□□□ -0.4
AP003500.1-201ENST00000626400 LGR6Q9HBX8 967 aa12.55□□□□□ -0.4
AP003500.1-201ENST00000626400 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
AP003500.1-201ENST00000626400 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
AP003500.1-201ENST00000626400 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
AP003500.1-201ENST00000626400 KCPQ6ZWJ8 1503 aa12.53□□□□□ -0.4
AP003500.1-201ENST00000626400 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
AP003500.1-201ENST00000626400 GNAI1P63096 354 aa12.53□□□□□ -0.4
AP003500.1-201ENST00000626400 MCM10Q7L590 875 aa12.53□□□□□ -0.4
AP003500.1-201ENST00000626400 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
AP003500.1-201ENST00000626400 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
AP003500.1-201ENST00000626400 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
AP003500.1-201ENST00000626400 SIK1P57059 783 aa12.52□□□□□ -0.41
AP003500.1-201ENST00000626400 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
AP003500.1-201ENST00000626400 TJP1Q07157 1748 aa12.51□□□□□ -0.41
AP003500.1-201ENST00000626400 CHL1O00533 1208 aa12.51□□□□□ -0.41
AP003500.1-201ENST00000626400 HOXB7P09629 217 aa12.51□□□□□ -0.41
AP003500.1-201ENST00000626400 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
AP003500.1-201ENST00000626400 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
AP003500.1-201ENST00000626400 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
AP003500.1-201ENST00000626400 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
AP003500.1-201ENST00000626400 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
AP003500.1-201ENST00000626400 ASAP1Q9ULH1 1129 aa12.5□□□□□ -0.41
AP003500.1-201ENST00000626400 ZNF521Q96K83 1311 aa12.5□□□□□ -0.41
AP003500.1-201ENST00000626400 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
AP003500.1-201ENST00000626400 UBR3Q6ZT12 1888 aa12.5□□□□□ -0.41
AP003500.1-201ENST00000626400 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
AP003500.1-201ENST00000626400 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 STARD3NLO95772 234 aa12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 DCTN1Q14203 1278 aa12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 MYH16Q9H6N6 1097 aa12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 MYH14Q7Z406 1995 aaKnown RBP12.48□□□□□ -0.41
AP003500.1-201ENST00000626400 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
AP003500.1-201ENST00000626400 EZH2Q15910 746 aaKnown RBP12.47□□□□□ -0.41
AP003500.1-201ENST00000626400 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
AP003500.1-201ENST00000626400 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.41
AP003500.1-201ENST00000626400 E9PSI1 815 aa12.46□□□□□ -0.41
AP003500.1-201ENST00000626400 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
AP003500.1-201ENST00000626400 PROM2Q8N271 834 aa12.46□□□□□ -0.41
AP003500.1-201ENST00000626400 ZNF496Q96IT1 587 aaPredicted RBP12.46□□□□□ -0.41
AP003500.1-201ENST00000626400 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
AP003500.1-201ENST00000626400 RGL2O15211 777 aa12.45□□□□□ -0.42
AP003500.1-201ENST00000626400 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
AP003500.1-201ENST00000626400 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
AP003500.1-201ENST00000626400 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
AP003500.1-201ENST00000626400 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
AP003500.1-201ENST00000626400 PTCD1O75127 700 aaKnown RBP12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 GIGYF1O75420 1035 aaPredicted RBP12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 SSFA2P28290 1259 aa12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 LRRC4BQ9NT99 713 aa12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 STK32BQ9NY57 414 aa12.44□□□□□ -0.42
AP003500.1-201ENST00000626400 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
AP003500.1-201ENST00000626400 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
AP003500.1-201ENST00000626400 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms