RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 HMMRO75330 724 aa18.69■□□□□ 0.58
LINC00552-201ENST00000625151 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
LINC00552-201ENST00000625151 REC8O95072 547 aa18.69■□□□□ 0.58
LINC00552-201ENST00000625151 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
LINC00552-201ENST00000625151 ST18O60284 1047 aa18.68■□□□□ 0.58
LINC00552-201ENST00000625151 PDE1AP54750 535 aa18.68■□□□□ 0.58
LINC00552-201ENST00000625151 ERC2O15083 957 aa18.68■□□□□ 0.58
LINC00552-201ENST00000625151 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
LINC00552-201ENST00000625151 OSBPL3Q9H4L5 887 aa18.68■□□□□ 0.58
LINC00552-201ENST00000625151 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
LINC00552-201ENST00000625151 TRIM44Q96DX7 344 aaPredicted RBP18.67■□□□□ 0.58
LINC00552-201ENST00000625151 NAP1L5Q96NT1 182 aaPredicted RBP18.67■□□□□ 0.58
LINC00552-201ENST00000625151 LMBRD1Q9NUN5 540 aa18.67■□□□□ 0.58
LINC00552-201ENST00000625151 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
LINC00552-201ENST00000625151 RGPD8O14715 1765 aaPredicted RBP18.67■□□□□ 0.58
LINC00552-201ENST00000625151 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
LINC00552-201ENST00000625151 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
LINC00552-201ENST00000625151 KDRP35968 1356 aa18.66■□□□□ 0.58
LINC00552-201ENST00000625151 CWC22Q9HCG8 908 aaKnown RBP18.66■□□□□ 0.58
LINC00552-201ENST00000625151 FLT4P35916 1363 aa18.65■□□□□ 0.58
LINC00552-201ENST00000625151 NASPP49321 788 aaPredicted RBP18.65■□□□□ 0.58
LINC00552-201ENST00000625151 GNAI2P04899 355 aa18.65■□□□□ 0.58
LINC00552-201ENST00000625151 ZDHHC9Q9Y397 364 aa18.65■□□□□ 0.58
LINC00552-201ENST00000625151 SBNO1A3KN83 1393 aa18.65■□□□□ 0.58
LINC00552-201ENST00000625151 EYA1Q99502 592 aa18.64■□□□□ 0.57
LINC00552-201ENST00000625151 SALL3Q9BXA9 1300 aa18.64■□□□□ 0.57
LINC00552-201ENST00000625151 LRRC37A3O60309 1634 aa18.64■□□□□ 0.57
LINC00552-201ENST00000625151 CAVIN1Q6NZI2 390 aaKnown RBP18.63■□□□□ 0.57
LINC00552-201ENST00000625151 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
LINC00552-201ENST00000625151 NCLP19338 710 aaKnown RBP18.63■□□□□ 0.57
LINC00552-201ENST00000625151 TTC21AQ8NDW8 1320 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 ZNF445P59923 1031 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 CCDC173Q0VFZ6 552 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 PIK3C2AO00443 1686 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 ZSCAN23Q3MJ62 389 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 PPP1R9BQ96SB3 815 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
LINC00552-201ENST00000625151 CACNA1FO60840 1977 aa18.61■□□□□ 0.57
LINC00552-201ENST00000625151 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
LINC00552-201ENST00000625151 FLIIQ13045 1269 aa18.61■□□□□ 0.57
LINC00552-201ENST00000625151 CHAMP1Q96JM3 812 aa18.61■□□□□ 0.57
LINC00552-201ENST00000625151 AMPHP49418 695 aa18.61■□□□□ 0.57
LINC00552-201ENST00000625151 NECTIN2Q92692 538 aa18.61■□□□□ 0.57
LINC00552-201ENST00000625151 FKBP5Q13451 457 aaPredicted RBP18.6■□□□□ 0.57
LINC00552-201ENST00000625151 LRRCC1Q9C099 1032 aa18.6■□□□□ 0.57
LINC00552-201ENST00000625151 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
LINC00552-201ENST00000625151 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
LINC00552-201ENST00000625151 NEK4P51957 841 aa18.6■□□□□ 0.57
LINC00552-201ENST00000625151 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
LINC00552-201ENST00000625151 MX1P20591 662 aa18.59■□□□□ 0.57
LINC00552-201ENST00000625151 GPT2Q8TD30 523 aa18.59■□□□□ 0.57
LINC00552-201ENST00000625151 TMX3Q96JJ7 454 aa18.58■□□□□ 0.57
LINC00552-201ENST00000625151 PALD1Q9ULE6 856 aa18.58■□□□□ 0.57
LINC00552-201ENST00000625151 GNAI3P08754 354 aa18.58■□□□□ 0.56
LINC00552-201ENST00000625151 ATP8B2P98198 1209 aa18.58■□□□□ 0.56
LINC00552-201ENST00000625151 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
LINC00552-201ENST00000625151 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
LINC00552-201ENST00000625151 RBM27Q9P2N5 1060 aaKnown RBP18.58■□□□□ 0.56
LINC00552-201ENST00000625151 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
LINC00552-201ENST00000625151 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
LINC00552-201ENST00000625151 RILPL2Q969X0 211 aa18.56■□□□□ 0.56
LINC00552-201ENST00000625151 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
LINC00552-201ENST00000625151 MARF1Q9Y4F3 1742 aaKnown RBP18.56■□□□□ 0.56
LINC00552-201ENST00000625151 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
LINC00552-201ENST00000625151 CHMLP26374 656 aa18.56■□□□□ 0.56
LINC00552-201ENST00000625151 ANP32BQ92688 251 aaKnown RBP18.56■□□□□ 0.56
LINC00552-201ENST00000625151 RBSNQ9H1K0 784 aa18.56■□□□□ 0.56
LINC00552-201ENST00000625151 NWD1Q149M9 1564 aa18.55■□□□□ 0.56
LINC00552-201ENST00000625151 TRIM6-TRIM34B2RNG4 842 aa18.55■□□□□ 0.56
LINC00552-201ENST00000625151 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
LINC00552-201ENST00000625151 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
LINC00552-201ENST00000625151 UNC5CLQ8IV45 518 aa18.55■□□□□ 0.56
LINC00552-201ENST00000625151 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
LINC00552-201ENST00000625151 ANO2Q9NQ90 1003 aa18.54■□□□□ 0.56
LINC00552-201ENST00000625151 NSFL1CQ9UNZ2 370 aaKnown RBP18.54■□□□□ 0.56
LINC00552-201ENST00000625151 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
LINC00552-201ENST00000625151 STRCQ7RTU9 1775 aa18.54■□□□□ 0.56
LINC00552-201ENST00000625151 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
LINC00552-201ENST00000625151 STAP2Q9UGK3 403 aa18.53■□□□□ 0.56
LINC00552-201ENST00000625151 NLRP6P59044 892 aa18.53■□□□□ 0.56
LINC00552-201ENST00000625151 CUL4AQ13619 759 aa18.53■□□□□ 0.56
LINC00552-201ENST00000625151 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
LINC00552-201ENST00000625151 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
LINC00552-201ENST00000625151 TMEM63CQ9P1W3 806 aa18.53■□□□□ 0.56
LINC00552-201ENST00000625151 MCCP23508 829 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 HOXC9P31274 260 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 MCM2P49736 904 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 MAP3K5Q99683 1374 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 ZSCAN30Q86W11 494 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 IL25Q9H293 177 aa18.52■□□□□ 0.56
LINC00552-201ENST00000625151 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.55
LINC00552-201ENST00000625151 ANAPC15P60006 121 aa18.51■□□□□ 0.55
LINC00552-201ENST00000625151 BRD1O95696 1058 aa18.51■□□□□ 0.55
LINC00552-201ENST00000625151 IL1RAPL2Q9NP60 686 aa18.51■□□□□ 0.55
LINC00552-201ENST00000625151 SRCIN1Q9C0H9 1055 aa18.5■□□□□ 0.55
LINC00552-201ENST00000625151 GLIPR1L2Q4G1C9 344 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms