RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
PMS1-221ENST00000624204 CCDC112Q8NEF3 446 aa18.18■□□□□ 0.5
PMS1-221ENST00000624204 PLCH2O75038 1416 aa18.18■□□□□ 0.5
PMS1-221ENST00000624204 HMMRO75330 724 aa18.17■□□□□ 0.5
PMS1-221ENST00000624204 CPA1P15085 419 aa18.17■□□□□ 0.5
PMS1-221ENST00000624204 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
PMS1-221ENST00000624204 GABPB1Q06547 395 aaPredicted RBP18.17■□□□□ 0.5
PMS1-221ENST00000624204 VPS37CA5D8V6 355 aaPredicted RBP18.17■□□□□ 0.5
PMS1-221ENST00000624204 F6X3S4 739 aa18.17■□□□□ 0.5
PMS1-221ENST00000624204 COL3A1P02461 1466 aaPredicted RBP18.16■□□□□ 0.5
PMS1-221ENST00000624204 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
PMS1-221ENST00000624204 MSH6P52701 1360 aa18.16■□□□□ 0.5
PMS1-221ENST00000624204 STX6O43752 255 aa18.16■□□□□ 0.5
PMS1-221ENST00000624204 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
PMS1-221ENST00000624204 TPD52L1Q16890 204 aaPredicted RBP18.16■□□□□ 0.5
PMS1-221ENST00000624204 TCHHQ07283 1943 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 SLFN14P0C7P3 912 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 LUZP1Q86V48 1076 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
PMS1-221ENST00000624204 DDX41Q9UJV9 622 aaKnown RBP18.15■□□□□ 0.5
PMS1-221ENST00000624204 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 ATP10DQ9P241 1426 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 CCDC66A2RUB6 948 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 SYT1P21579 422 aa18.15■□□□□ 0.5
PMS1-221ENST00000624204 DNM1Q05193 864 aaKnown RBP18.15■□□□□ 0.5
PMS1-221ENST00000624204 SMTNL1A8MU46 457 aa18.14■□□□□ 0.5
PMS1-221ENST00000624204 NRBP1Q9UHY1 535 aa18.14■□□□□ 0.5
PMS1-221ENST00000624204 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.5
PMS1-221ENST00000624204 TET3O43151 1660 aa18.14■□□□□ 0.49
PMS1-221ENST00000624204 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
PMS1-221ENST00000624204 TRIM5Q9C035 493 aa18.14■□□□□ 0.49
PMS1-221ENST00000624204 IRX5P78411 483 aaPredicted RBP18.14■□□□□ 0.49
PMS1-221ENST00000624204 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
PMS1-221ENST00000624204 RTL1A6NKG5 1358 aa18.14■□□□□ 0.49
PMS1-221ENST00000624204 FAM173BQ6P4H8 233 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 CERS3Q8IU89 383 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 CHMLP26374 656 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 ANAPC15P60006 121 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 ATP6V1DQ9Y5K8 247 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 TMEM87AQ8NBN3 555 aa18.13■□□□□ 0.49
PMS1-221ENST00000624204 RGS12O14924 1447 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 F13A1P00488 732 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 KRT222Q8N1A0 295 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 ZFP91Q96JP5 570 aaPredicted RBP18.12■□□□□ 0.49
PMS1-221ENST00000624204 FUCA2Q9BTY2 467 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 ZNF853P0CG23 659 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 TERF2Q15554 542 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 POLKQ9UBT6 870 aa18.12■□□□□ 0.49
PMS1-221ENST00000624204 RPAP1Q9BWH6 1393 aaPredicted RBP18.12■□□□□ 0.49
PMS1-221ENST00000624204 KIF18AQ8NI77 898 aa18.11■□□□□ 0.49
PMS1-221ENST00000624204 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
PMS1-221ENST00000624204 KNDC1Q76NI1 1749 aa18.11■□□□□ 0.49
PMS1-221ENST00000624204 KIF1BO60333 1816 aa18.11■□□□□ 0.49
PMS1-221ENST00000624204 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
PMS1-221ENST00000624204 TIGD1Q96MW7 591 aa18.11■□□□□ 0.49
PMS1-221ENST00000624204 FOSBP53539 338 aa18.1■□□□□ 0.49
PMS1-221ENST00000624204 FAM200AQ8TCP9 573 aa18.1■□□□□ 0.49
PMS1-221ENST00000624204 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
PMS1-221ENST00000624204 UNC5CLQ8IV45 518 aa18.1■□□□□ 0.49
PMS1-221ENST00000624204 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
PMS1-221ENST00000624204 TRMT1Q9NXH9 659 aaKnown RBP18.1■□□□□ 0.49
PMS1-221ENST00000624204 ABCC1P33527 1531 aa18.1■□□□□ 0.49
PMS1-221ENST00000624204 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
PMS1-221ENST00000624204 PUS7Q96PZ0 661 aaKnown RBP18.09■□□□□ 0.49
PMS1-221ENST00000624204 ST7Q9NRC1 585 aa18.09■□□□□ 0.49
PMS1-221ENST00000624204 IPO4Q8TEX9 1081 aaKnown RBP18.09■□□□□ 0.49
PMS1-221ENST00000624204 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
PMS1-221ENST00000624204 SLC4A2P04920 1241 aa18.08■□□□□ 0.49
PMS1-221ENST00000624204 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.49
PMS1-221ENST00000624204 IL25Q9H293 177 aa18.08■□□□□ 0.49
PMS1-221ENST00000624204 OSBPL3Q9H4L5 887 aa18.08■□□□□ 0.49
PMS1-221ENST00000624204 NRXN1Q9ULB1 1477 aa18.08■□□□□ 0.49
PMS1-221ENST00000624204 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.49
PMS1-221ENST00000624204 CCDC83Q8IWF9 413 aa18.08■□□□□ 0.48
PMS1-221ENST00000624204 MORC2Q9Y6X9 1032 aaPredicted RBP18.08■□□□□ 0.48
PMS1-221ENST00000624204 AK2P54819 239 aa18.08■□□□□ 0.48
PMS1-221ENST00000624204 MAP3K11Q16584 847 aa18.08■□□□□ 0.48
PMS1-221ENST00000624204 PAXBP1Q9Y5B6 917 aa18.08■□□□□ 0.48
PMS1-221ENST00000624204 MROH2AA6NES4 1674 aa18.08■□□□□ 0.48
PMS1-221ENST00000624204 TYRO3Q06418 890 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 CEP135Q66GS9 1140 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
PMS1-221ENST00000624204 NUP62CLQ9H1M0 184 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 KIF24Q5T7B8 1368 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
PMS1-221ENST00000624204 ZSCAN25Q6NSZ9 544 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 ARHGEF40Q8TER5 1519 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 INO80Q9ULG1 1556 aaPredicted RBP18.07■□□□□ 0.48
PMS1-221ENST00000624204 NUTM2FA1L443 756 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 ANO6Q4KMQ2 910 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 MCM10Q7L590 875 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
PMS1-221ENST00000624204 ZNF215Q9UL58 517 aaPredicted RBP18.07■□□□□ 0.48
PMS1-221ENST00000624204 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 SETBP1Q9Y6X0 1596 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms