RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
AGAP3-226ENST00000622464 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
AGAP3-226ENST00000622464 CHPF2Q9P2E5 772 aa16.31■□□□□ 0.2
AGAP3-226ENST00000622464 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
AGAP3-226ENST00000622464 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
AGAP3-226ENST00000622464 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
AGAP3-226ENST00000622464 TBC1D9Q6ZT07 1266 aa16.3■□□□□ 0.2
AGAP3-226ENST00000622464 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
AGAP3-226ENST00000622464 DCTPP1Q9H773 170 aa16.3■□□□□ 0.2
AGAP3-226ENST00000622464 PNMA6EA0A0J9YXQ4 647 aa16.29■□□□□ 0.2
AGAP3-226ENST00000622464 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
AGAP3-226ENST00000622464 CHMP4BQ9H444 224 aaKnown RBP16.29■□□□□ 0.2
AGAP3-226ENST00000622464 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
AGAP3-226ENST00000622464 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
AGAP3-226ENST00000622464 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
AGAP3-226ENST00000622464 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
AGAP3-226ENST00000622464 PIP4K2AP48426 406 aaPredicted RBP16.28■□□□□ 0.2
AGAP3-226ENST00000622464 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
AGAP3-226ENST00000622464 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
AGAP3-226ENST00000622464 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
AGAP3-226ENST00000622464 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
AGAP3-226ENST00000622464 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.19
AGAP3-226ENST00000622464 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.19
AGAP3-226ENST00000622464 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
AGAP3-226ENST00000622464 BECN1Q14457 450 aa16.26■□□□□ 0.19
AGAP3-226ENST00000622464 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
AGAP3-226ENST00000622464 RGPD5Q99666 1765 aa16.25■□□□□ 0.19
AGAP3-226ENST00000622464 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
AGAP3-226ENST00000622464 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
AGAP3-226ENST00000622464 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
AGAP3-226ENST00000622464 GNAI2P04899 355 aa16.24■□□□□ 0.19
AGAP3-226ENST00000622464 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
AGAP3-226ENST00000622464 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
AGAP3-226ENST00000622464 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
AGAP3-226ENST00000622464 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
AGAP3-226ENST00000622464 AKAP4Q5JQC9 854 aa16.24■□□□□ 0.19
AGAP3-226ENST00000622464 IL1RAPL2Q9NP60 686 aa16.24■□□□□ 0.19
AGAP3-226ENST00000622464 CD2BP2O95400 341 aaKnown RBP16.23■□□□□ 0.19
AGAP3-226ENST00000622464 ERBB3P21860 1342 aa16.23■□□□□ 0.19
AGAP3-226ENST00000622464 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
AGAP3-226ENST00000622464 LRRC37A3O60309 1634 aa16.23■□□□□ 0.19
AGAP3-226ENST00000622464 NBPF7P0C2Y1 421 aaPredicted RBP16.23■□□□□ 0.19
AGAP3-226ENST00000622464 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
AGAP3-226ENST00000622464 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
AGAP3-226ENST00000622464 MST1RQ04912 1400 aa16.22■□□□□ 0.19
AGAP3-226ENST00000622464 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
AGAP3-226ENST00000622464 SDSP20132 328 aa16.21■□□□□ 0.19
AGAP3-226ENST00000622464 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.19
AGAP3-226ENST00000622464 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
AGAP3-226ENST00000622464 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
AGAP3-226ENST00000622464 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
AGAP3-226ENST00000622464 USP54Q70EL1 1684 aa16.2■□□□□ 0.18
AGAP3-226ENST00000622464 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
AGAP3-226ENST00000622464 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
AGAP3-226ENST00000622464 MYL6BP14649 208 aa16.19■□□□□ 0.18
AGAP3-226ENST00000622464 CWF19L2Q2TBE0 894 aaKnown RBP16.19■□□□□ 0.18
AGAP3-226ENST00000622464 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
AGAP3-226ENST00000622464 CDC45O75419 566 aa16.19■□□□□ 0.18
AGAP3-226ENST00000622464 JARID2Q92833 1246 aaPredicted RBP16.19■□□□□ 0.18
AGAP3-226ENST00000622464 HMMRO75330 724 aa16.19■□□□□ 0.18
AGAP3-226ENST00000622464 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
AGAP3-226ENST00000622464 NUTM1Q86Y26 1132 aa16.18■□□□□ 0.18
AGAP3-226ENST00000622464 KIF2CQ99661 725 aa16.18■□□□□ 0.18
AGAP3-226ENST00000622464 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
AGAP3-226ENST00000622464 SLIT3O75094 1523 aa16.18■□□□□ 0.18
AGAP3-226ENST00000622464 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 ARXQ96QS3 562 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
AGAP3-226ENST00000622464 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
AGAP3-226ENST00000622464 GNAI3P08754 354 aa16.16■□□□□ 0.18
AGAP3-226ENST00000622464 MEGF6O75095 1541 aa16.16■□□□□ 0.18
AGAP3-226ENST00000622464 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
AGAP3-226ENST00000622464 PDE1AP54750 535 aa16.16■□□□□ 0.18
AGAP3-226ENST00000622464 CADPS2Q86UW7 1296 aa16.16■□□□□ 0.18
AGAP3-226ENST00000622464 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
AGAP3-226ENST00000622464 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
AGAP3-226ENST00000622464 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
AGAP3-226ENST00000622464 ADCY9O60503 1353 aa16.15■□□□□ 0.18
AGAP3-226ENST00000622464 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.18
AGAP3-226ENST00000622464 ATP8B2P98198 1209 aa16.14■□□□□ 0.18
AGAP3-226ENST00000622464 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.18
AGAP3-226ENST00000622464 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.18
AGAP3-226ENST00000622464 NPHP3Q7Z494 1330 aa16.14■□□□□ 0.17
AGAP3-226ENST00000622464 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
AGAP3-226ENST00000622464 RBM25P49756 843 aaKnown RBP16.14■□□□□ 0.17
AGAP3-226ENST00000622464 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
AGAP3-226ENST00000622464 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
AGAP3-226ENST00000622464 PA2G4Q9UQ80 394 aaKnown RBP16.14■□□□□ 0.17
AGAP3-226ENST00000622464 CYP27B1O15528 508 aa16.13■□□□□ 0.17
AGAP3-226ENST00000622464 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
AGAP3-226ENST00000622464 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
AGAP3-226ENST00000622464 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
AGAP3-226ENST00000622464 PHKG2P15735 406 aa16.12■□□□□ 0.17
AGAP3-226ENST00000622464 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
AGAP3-226ENST00000622464 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms