RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 UBR2Q8IWV8 1755 aa14.37□□□□□ -0.11
POLR2J3-221ENST00000621093 UPF1Q92900 1129 aaKnown RBP eCLIP14.37□□□□□ -0.11
POLR2J3-221ENST00000621093 TEFQ10587 303 aa14.36□□□□□ -0.11
POLR2J3-221ENST00000621093 APBA3O96018 575 aa14.35□□□□□ -0.11
POLR2J3-221ENST00000621093 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
POLR2J3-221ENST00000621093 SLC39A6Q13433 755 aa14.35□□□□□ -0.11
POLR2J3-221ENST00000621093 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
POLR2J3-221ENST00000621093 ASAP1Q9ULH1 1129 aa14.35□□□□□ -0.11
POLR2J3-221ENST00000621093 RGPD3A6NKT7 1758 aaPredicted RBP14.34□□□□□ -0.11
POLR2J3-221ENST00000621093 RGPD4Q7Z3J3 1758 aa14.34□□□□□ -0.11
POLR2J3-221ENST00000621093 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
POLR2J3-221ENST00000621093 KCNQ3O43525 872 aa14.34□□□□□ -0.11
POLR2J3-221ENST00000621093 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
POLR2J3-221ENST00000621093 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
POLR2J3-221ENST00000621093 RREB1Q92766 1687 aa14.33□□□□□ -0.11
POLR2J3-221ENST00000621093 TJP1Q07157 1748 aa14.33□□□□□ -0.12
POLR2J3-221ENST00000621093 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.12
POLR2J3-221ENST00000621093 CCDC27Q2M243 656 aa14.33□□□□□ -0.12
POLR2J3-221ENST00000621093 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
POLR2J3-221ENST00000621093 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-221ENST00000621093 C5P01031 1676 aa14.33□□□□□ -0.12
POLR2J3-221ENST00000621093 EP400Q96L91 3159 aa14.32□□□□□ -0.12
POLR2J3-221ENST00000621093 BTBD11A6QL63 1104 aa14.32□□□□□ -0.12
POLR2J3-221ENST00000621093 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
POLR2J3-221ENST00000621093 EN1Q05925 392 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-221ENST00000621093 TAF7Q15545 349 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-221ENST00000621093 NUP188Q5SRE5 1749 aa14.32□□□□□ -0.12
POLR2J3-221ENST00000621093 KCNQ4P56696 695 aa14.31□□□□□ -0.12
POLR2J3-221ENST00000621093 SF3B2Q13435 895 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-221ENST00000621093 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-221ENST00000621093 ZNF521Q96K83 1311 aa14.31□□□□□ -0.12
POLR2J3-221ENST00000621093 PALLDQ8WX93 1383 aa14.31□□□□□ -0.12
POLR2J3-221ENST00000621093 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-221ENST00000621093 EZH2Q15910 746 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-221ENST00000621093 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-221ENST00000621093 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
POLR2J3-221ENST00000621093 PTCD1O75127 700 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 ZNF790Q6PG37 636 aa14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 CCDC125Q86Z20 511 aa14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 PROM2Q8N271 834 aa14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 CAMKK2Q96RR4 588 aa14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 TSPYL4Q9UJ04 414 aa14.29□□□□□ -0.12
POLR2J3-221ENST00000621093 CHL1O00533 1208 aa14.28□□□□□ -0.12
POLR2J3-221ENST00000621093 PLSCR1O15162 318 aa14.28□□□□□ -0.12
POLR2J3-221ENST00000621093 ZNF853P0CG23 659 aa14.28□□□□□ -0.12
POLR2J3-221ENST00000621093 BAG6P46379 1132 aa14.28□□□□□ -0.12
POLR2J3-221ENST00000621093 SMARCC1Q92922 1105 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-221ENST00000621093 CICQ96RK0 1608 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-221ENST00000621093 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.12
POLR2J3-221ENST00000621093 LAMB4A4D0S4 1761 aa14.27□□□□□ -0.12
POLR2J3-221ENST00000621093 TXNRD1Q16881 649 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 WDR63Q8IWG1 891 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 TTC5Q8N0Z6 440 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 NGEFQ8N5V2 710 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 MBIPQ9NS73 344 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 LRRC4BQ9NT99 713 aa14.27□□□□□ -0.13
POLR2J3-221ENST00000621093 MYH14Q7Z406 1995 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 LOC102724428A0A0B4J2F2 783 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 SIK1P57059 783 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 ITPK1Q13572 414 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 KRT24Q2M2I5 525 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
POLR2J3-221ENST00000621093 IL16Q14005 1332 aa14.25□□□□□ -0.13
POLR2J3-221ENST00000621093 C4BP0C0L5 1744 aa14.25□□□□□ -0.13
POLR2J3-221ENST00000621093 EIF4A1P60842 406 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-221ENST00000621093 GNAI1P63096 354 aa14.25□□□□□ -0.13
POLR2J3-221ENST00000621093 CCNL1Q9UK58 526 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-221ENST00000621093 HEG1Q9ULI3 1381 aa14.24□□□□□ -0.13
POLR2J3-221ENST00000621093 SOCS7O14512 581 aa14.24□□□□□ -0.13
POLR2J3-221ENST00000621093 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
POLR2J3-221ENST00000621093 DNAJC10Q8IXB1 793 aa14.24□□□□□ -0.13
POLR2J3-221ENST00000621093 FMNL2Q96PY5 1086 aa14.24□□□□□ -0.13
POLR2J3-221ENST00000621093 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
POLR2J3-221ENST00000621093 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
POLR2J3-221ENST00000621093 LINC00116Q8NCU8 138 aa14.23□□□□□ -0.13
POLR2J3-221ENST00000621093 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
POLR2J3-221ENST00000621093 UBR3Q6ZT12 1888 aa14.23□□□□□ -0.13
POLR2J3-221ENST00000621093 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
POLR2J3-221ENST00000621093 SLFN5Q08AF3 891 aa14.22□□□□□ -0.13
POLR2J3-221ENST00000621093 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.13
POLR2J3-221ENST00000621093 C8orf58Q8NAV2 365 aa14.21□□□□□ -0.13
POLR2J3-221ENST00000621093 USP16Q9Y5T5 823 aa14.21□□□□□ -0.13
POLR2J3-221ENST00000621093 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-221ENST00000621093 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-221ENST00000621093 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-221ENST00000621093 TSPYL6Q8N831 410 aa14.2□□□□□ -0.14
POLR2J3-221ENST00000621093 E9PSI1 815 aa14.19□□□□□ -0.14
POLR2J3-221ENST00000621093 SNRPA1P09661 255 aaKnown RBP14.19□□□□□ -0.14
POLR2J3-221ENST00000621093 CYP19A1P11511 503 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-221ENST00000621093 ZNF827Q17R98 1081 aa14.19□□□□□ -0.14
POLR2J3-221ENST00000621093 SMIM5Q71RC9 77 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms