RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 BCL11BQ9C0K0 894 aaPredicted RBP17.92■□□□□ 0.46
NEK3-210ENST00000620675 ASAP1Q9ULH1 1129 aa17.92■□□□□ 0.46
NEK3-210ENST00000620675 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
NEK3-210ENST00000620675 KCNQ3O43525 872 aa17.91■□□□□ 0.46
NEK3-210ENST00000620675 TEFQ10587 303 aa17.91■□□□□ 0.46
NEK3-210ENST00000620675 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
NEK3-210ENST00000620675 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
NEK3-210ENST00000620675 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
NEK3-210ENST00000620675 LY75O60449 1722 aa17.9■□□□□ 0.46
NEK3-210ENST00000620675 UBR2Q8IWV8 1755 aa17.9■□□□□ 0.46
NEK3-210ENST00000620675 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.45
NEK3-210ENST00000620675 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
NEK3-210ENST00000620675 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
NEK3-210ENST00000620675 APBA3O96018 575 aa17.89■□□□□ 0.45
NEK3-210ENST00000620675 KCNQ4P56696 695 aa17.89■□□□□ 0.45
NEK3-210ENST00000620675 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
NEK3-210ENST00000620675 CCDC27Q2M243 656 aa17.88■□□□□ 0.45
NEK3-210ENST00000620675 ZNF521Q96K83 1311 aa17.88■□□□□ 0.45
NEK3-210ENST00000620675 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
NEK3-210ENST00000620675 TAF7Q15545 349 aaPredicted RBP17.87■□□□□ 0.45
NEK3-210ENST00000620675 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
NEK3-210ENST00000620675 EN1Q05925 392 aaPredicted RBP17.86■□□□□ 0.45
NEK3-210ENST00000620675 KCPQ6ZWJ8 1503 aa17.86■□□□□ 0.45
NEK3-210ENST00000620675 PROM2Q8N271 834 aa17.86■□□□□ 0.45
NEK3-210ENST00000620675 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
NEK3-210ENST00000620675 SLC4A9Q96Q91 983 aa17.86■□□□□ 0.45
NEK3-210ENST00000620675 TAF1LQ8IZX4 1826 aa17.85■□□□□ 0.45
NEK3-210ENST00000620675 PALLDQ8WX93 1383 aa17.85■□□□□ 0.45
NEK3-210ENST00000620675 PTCD1O75127 700 aaKnown RBP17.85■□□□□ 0.45
NEK3-210ENST00000620675 C5P01031 1676 aa17.84■□□□□ 0.45
NEK3-210ENST00000620675 ZNF790Q6PG37 636 aa17.84■□□□□ 0.45
NEK3-210ENST00000620675 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
NEK3-210ENST00000620675 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
NEK3-210ENST00000620675 ZNF853P0CG23 659 aa17.83■□□□□ 0.45
NEK3-210ENST00000620675 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.45
NEK3-210ENST00000620675 KRT24Q2M2I5 525 aa17.83■□□□□ 0.45
NEK3-210ENST00000620675 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.45
NEK3-210ENST00000620675 RGPD3A6NKT7 1758 aaPredicted RBP17.83■□□□□ 0.45
NEK3-210ENST00000620675 RGPD4Q7Z3J3 1758 aa17.83■□□□□ 0.45
NEK3-210ENST00000620675 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.44
NEK3-210ENST00000620675 TJP1Q07157 1748 aa17.83■□□□□ 0.44
NEK3-210ENST00000620675 CHL1O00533 1208 aa17.83■□□□□ 0.44
NEK3-210ENST00000620675 ZNF496Q96IT1 587 aaPredicted RBP17.83■□□□□ 0.44
NEK3-210ENST00000620675 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
NEK3-210ENST00000620675 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
NEK3-210ENST00000620675 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
NEK3-210ENST00000620675 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
NEK3-210ENST00000620675 RREB1Q92766 1687 aa17.82■□□□□ 0.44
NEK3-210ENST00000620675 PRAMEF22A3QJZ6 481 aa17.81■□□□□ 0.44
NEK3-210ENST00000620675 CFAP44Q96MT7 982 aa17.81■□□□□ 0.44
NEK3-210ENST00000620675 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
NEK3-210ENST00000620675 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
NEK3-210ENST00000620675 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
NEK3-210ENST00000620675 PLSCR1O15162 318 aa17.8■□□□□ 0.44
NEK3-210ENST00000620675 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
NEK3-210ENST00000620675 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
NEK3-210ENST00000620675 LOC102724428A0A0B4J2F2 783 aa17.79■□□□□ 0.44
NEK3-210ENST00000620675 SIK1P57059 783 aa17.79■□□□□ 0.44
NEK3-210ENST00000620675 ITPK1Q13572 414 aa17.79■□□□□ 0.44
NEK3-210ENST00000620675 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
NEK3-210ENST00000620675 TXNRD1Q16881 649 aa17.79■□□□□ 0.44
NEK3-210ENST00000620675 TTC5Q8N0Z6 440 aa17.79■□□□□ 0.44
NEK3-210ENST00000620675 NGEFQ8N5V2 710 aa17.79■□□□□ 0.44
NEK3-210ENST00000620675 BAG6P46379 1132 aa17.78■□□□□ 0.44
NEK3-210ENST00000620675 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
NEK3-210ENST00000620675 CCDC125Q86Z20 511 aa17.78■□□□□ 0.44
NEK3-210ENST00000620675 SMARCC1Q92922 1105 aaPredicted RBP17.78■□□□□ 0.44
NEK3-210ENST00000620675 GNAI1P63096 354 aa17.78■□□□□ 0.44
NEK3-210ENST00000620675 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
NEK3-210ENST00000620675 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.44
NEK3-210ENST00000620675 ZNF831Q5JPB2 1677 aa17.77■□□□□ 0.44
NEK3-210ENST00000620675 IL16Q14005 1332 aa17.77■□□□□ 0.43
NEK3-210ENST00000620675 ZBED9Q6R2W3 1325 aa17.77■□□□□ 0.43
NEK3-210ENST00000620675 ATP6V1AP38606 617 aa17.76■□□□□ 0.43
NEK3-210ENST00000620675 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
NEK3-210ENST00000620675 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
NEK3-210ENST00000620675 HEG1Q9ULI3 1381 aa17.76■□□□□ 0.43
NEK3-210ENST00000620675 CALD1Q05682 793 aaKnown RBP17.76■□□□□ 0.43
NEK3-210ENST00000620675 DNAJC10Q8IXB1 793 aa17.76■□□□□ 0.43
NEK3-210ENST00000620675 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
NEK3-210ENST00000620675 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
NEK3-210ENST00000620675 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
NEK3-210ENST00000620675 LINC00116Q8NCU8 138 aa17.75■□□□□ 0.43
NEK3-210ENST00000620675 CICQ96RK0 1608 aaPredicted RBP17.75■□□□□ 0.43
NEK3-210ENST00000620675 LAMB4A4D0S4 1761 aa17.75■□□□□ 0.43
NEK3-210ENST00000620675 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
NEK3-210ENST00000620675 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
NEK3-210ENST00000620675 C4BP0C0L5 1744 aa17.74■□□□□ 0.43
NEK3-210ENST00000620675 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
NEK3-210ENST00000620675 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
NEK3-210ENST00000620675 USP16Q9Y5T5 823 aa17.74■□□□□ 0.43
NEK3-210ENST00000620675 SOCS7O14512 581 aa17.73■□□□□ 0.43
NEK3-210ENST00000620675 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
NEK3-210ENST00000620675 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
NEK3-210ENST00000620675 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
NEK3-210ENST00000620675 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
NEK3-210ENST00000620675 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
NEK3-210ENST00000620675 UBR3Q6ZT12 1888 aa17.72■□□□□ 0.43
NEK3-210ENST00000620675 EXOSC9Q06265 439 aaKnown RBP17.71■□□□□ 0.43
NEK3-210ENST00000620675 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms