RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 CCDC181Q5TID7 509 aa16.59■□□□□ 0.25
AGRN-210ENST00000620552 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
AGRN-210ENST00000620552 MRE11P49959 708 aa16.59■□□□□ 0.25
AGRN-210ENST00000620552 IFIT5Q13325 482 aaKnown RBP16.59■□□□□ 0.25
AGRN-210ENST00000620552 SEPT7Q16181 437 aaKnown RBP16.59■□□□□ 0.25
AGRN-210ENST00000620552 WDR78Q5VTH9 848 aa16.59■□□□□ 0.25
AGRN-210ENST00000620552 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.25
AGRN-210ENST00000620552 ANKRD62A6NC57 917 aa16.58■□□□□ 0.25
AGRN-210ENST00000620552 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.25
AGRN-210ENST00000620552 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
AGRN-210ENST00000620552 NEBLO76041 1014 aa16.58■□□□□ 0.24
AGRN-210ENST00000620552 NME9Q86XW9 330 aa16.58■□□□□ 0.24
AGRN-210ENST00000620552 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
AGRN-210ENST00000620552 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
AGRN-210ENST00000620552 KRT32Q14532 448 aa16.58■□□□□ 0.24
AGRN-210ENST00000620552 EXOC5O00471 708 aa16.57■□□□□ 0.24
AGRN-210ENST00000620552 SLC5A1P13866 664 aa16.57■□□□□ 0.24
AGRN-210ENST00000620552 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
AGRN-210ENST00000620552 GPTP24298 496 aa16.57■□□□□ 0.24
AGRN-210ENST00000620552 CCDC96Q2M329 555 aa16.57■□□□□ 0.24
AGRN-210ENST00000620552 CFAP45Q9UL16 551 aa16.57■□□□□ 0.24
AGRN-210ENST00000620552 LRPPRCP42704 1394 aaKnown RBP16.57■□□□□ 0.24
AGRN-210ENST00000620552 SSR1P43307 286 aaKnown RBP16.56■□□□□ 0.24
AGRN-210ENST00000620552 PPM1FP49593 454 aaPredicted RBP16.56■□□□□ 0.24
AGRN-210ENST00000620552 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
AGRN-210ENST00000620552 KIF1BPQ96EK5 621 aa16.56■□□□□ 0.24
AGRN-210ENST00000620552 DESP17661 470 aa16.56■□□□□ 0.24
AGRN-210ENST00000620552 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
AGRN-210ENST00000620552 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
AGRN-210ENST00000620552 NAPBQ9H115 298 aa16.56■□□□□ 0.24
AGRN-210ENST00000620552 CEP131Q9UPN4 1083 aa16.56■□□□□ 0.24
AGRN-210ENST00000620552 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
AGRN-210ENST00000620552 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
AGRN-210ENST00000620552 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
AGRN-210ENST00000620552 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
AGRN-210ENST00000620552 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
AGRN-210ENST00000620552 RANBP6O60518 1105 aaKnown RBP16.54■□□□□ 0.24
AGRN-210ENST00000620552 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
AGRN-210ENST00000620552 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
AGRN-210ENST00000620552 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
AGRN-210ENST00000620552 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
AGRN-210ENST00000620552 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
AGRN-210ENST00000620552 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 PPP4R3AQ6IN85 833 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 ZSCAN31Q96LW9 406 aaPredicted RBP16.53■□□□□ 0.24
AGRN-210ENST00000620552 CBFA2T2O43439 604 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 MAP3K12Q12852 859 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 DHX8Q14562 1220 aaKnown RBP16.53■□□□□ 0.24
AGRN-210ENST00000620552 TXLNBQ8N3L3 684 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 NAIPQ13075 1403 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 MPNDQ8N594 471 aa16.53■□□□□ 0.24
AGRN-210ENST00000620552 ZNF622Q969S3 477 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■□□□□ 9.7
AGRN-210ENST00000620552 GOLGA6L10A6NI86 522 aa16.52■□□□□ 0.24
AGRN-210ENST00000620552 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.24
AGRN-210ENST00000620552 RFC4P35249 363 aa16.52■□□□□ 0.23
AGRN-210ENST00000620552 CUL5Q93034 780 aa16.52■□□□□ 0.23
AGRN-210ENST00000620552 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.23
AGRN-210ENST00000620552 F6X3S4 739 aa16.52■□□□□ 0.23
AGRN-210ENST00000620552 ENOX2Q16206 610 aaKnown RBP16.52■□□□□ 0.23
AGRN-210ENST00000620552 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.23
AGRN-210ENST00000620552 HYPKQ9NX55 129 aa16.52■□□□□ 0.23
AGRN-210ENST00000620552 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
AGRN-210ENST00000620552 WASLO00401 505 aaPredicted RBP16.51■□□□□ 0.23
AGRN-210ENST00000620552 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
AGRN-210ENST00000620552 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
AGRN-210ENST00000620552 ZRSR2Q15696 482 aaKnown RBP16.51■□□□□ 0.23
AGRN-210ENST00000620552 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
AGRN-210ENST00000620552 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
AGRN-210ENST00000620552 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
AGRN-210ENST00000620552 GRM1Q13255 1194 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 MX1P20591 662 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 MAP3K2Q9Y2U5 619 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 H0YHG0 523 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
AGRN-210ENST00000620552 KIAA1328Q86T90 577 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 CCDC83Q8IWF9 413 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
AGRN-210ENST00000620552 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
AGRN-210ENST00000620552 ZNF213O14771 459 aa16.49■□□□□ 0.23
AGRN-210ENST00000620552 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
AGRN-210ENST00000620552 CAMK4Q16566 473 aa16.49■□□□□ 0.23
AGRN-210ENST00000620552 NUP62CLQ9H1M0 184 aa16.49■□□□□ 0.23
AGRN-210ENST00000620552 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
AGRN-210ENST00000620552 ST5P78524 1137 aa16.49■□□□□ 0.23
AGRN-210ENST00000620552 A0A087WZG4 1122 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
AGRN-210ENST00000620552 GUCY1B3Q02153 619 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 ZNF397Q8NF99 534 aaPredicted RBP16.48■□□□□ 0.23
AGRN-210ENST00000620552 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 DNAI2Q9GZS0 605 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
AGRN-210ENST00000620552 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 LIG1P18858 919 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms