RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
DKC1-213ENST00000620277 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
DKC1-213ENST00000620277 TSC1Q92574 1164 aa19.53■□□□□ 0.72
DKC1-213ENST00000620277 ESYT1Q9BSJ8 1104 aa19.53■□□□□ 0.72
DKC1-213ENST00000620277 NLRP6P59044 892 aa19.52■□□□□ 0.72
DKC1-213ENST00000620277 EYA1Q99502 592 aa19.52■□□□□ 0.72
DKC1-213ENST00000620277 ISY1Q9ULR0 285 aaKnown RBP19.52■□□□□ 0.71
DKC1-213ENST00000620277 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
DKC1-213ENST00000620277 OS9Q13438 667 aaPredicted RBP19.51■□□□□ 0.71
DKC1-213ENST00000620277 CYP2E1P05181 493 aaPredicted RBP19.51■□□□□ 0.71
DKC1-213ENST00000620277 PTMSP20962 102 aa19.51■□□□□ 0.71
DKC1-213ENST00000620277 CWC27Q6UX04 472 aaKnown RBP19.51■□□□□ 0.71
DKC1-213ENST00000620277 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
DKC1-213ENST00000620277 GLIPR1L2Q4G1C9 344 aa19.5■□□□□ 0.71
DKC1-213ENST00000620277 DIP2CQ9Y2E4 1556 aa19.5■□□□□ 0.71
DKC1-213ENST00000620277 KNDC1Q76NI1 1749 aa19.5■□□□□ 0.71
DKC1-213ENST00000620277 PPP1R9BQ96SB3 815 aa19.5■□□□□ 0.71
DKC1-213ENST00000620277 FIBPO43427 364 aa19.49■□□□□ 0.71
DKC1-213ENST00000620277 CHMLP26374 656 aa19.49■□□□□ 0.71
DKC1-213ENST00000620277 CWC22Q9HCG8 908 aaKnown RBP19.49■□□□□ 0.71
DKC1-213ENST00000620277 ZNF445P59923 1031 aa19.48■□□□□ 0.71
DKC1-213ENST00000620277 RGS12O14924 1447 aa19.48■□□□□ 0.71
DKC1-213ENST00000620277 MCCP23508 829 aa19.48■□□□□ 0.71
DKC1-213ENST00000620277 UBTFL1P0CB47 393 aaPredicted RBP19.48■□□□□ 0.71
DKC1-213ENST00000620277 USP48Q86UV5 1035 aa19.47■□□□□ 0.71
DKC1-213ENST00000620277 TCEANC2Q96MN5 208 aa19.47■□□□□ 0.71
DKC1-213ENST00000620277 CNPY2Q9Y2B0 182 aa19.47■□□□□ 0.71
DKC1-213ENST00000620277 PTPRCP08575 1304 aa19.47■□□□□ 0.71
DKC1-213ENST00000620277 CCT4P50991 539 aaKnown RBP19.46■□□□□ 0.71
DKC1-213ENST00000620277 LRSAM1Q6UWE0 723 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 USP25Q9UHP3 1055 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 CCDC9Q9Y3X0 531 aaKnown RBP19.46■□□□□ 0.71
DKC1-213ENST00000620277 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 SRGAP3O43295 1099 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 LMOD2Q6P5Q4 547 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 PPP1R42Q7Z4L9 355 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.46■□□□□ 0.71
DKC1-213ENST00000620277 ROBO2Q9HCK4 1378 aa19.46■□□□□ 0.71
DKC1-213ENST00000620277 HDGFL1Q5TGJ6 251 aa19.45■□□□□ 0.7
DKC1-213ENST00000620277 UQCRHLA0A096LP55 91 aa19.45■□□□□ 0.7
DKC1-213ENST00000620277 UQCRHP07919 91 aa19.45■□□□□ 0.7
DKC1-213ENST00000620277 CPSF1Q10570 1443 aaKnown RBP19.45■□□□□ 0.7
DKC1-213ENST00000620277 RRP9O43818 475 aaKnown RBP19.45■□□□□ 0.7
DKC1-213ENST00000620277 NBPF7P0C2Y1 421 aaPredicted RBP19.45■□□□□ 0.7
DKC1-213ENST00000620277 LTKP29376 864 aa19.45■□□□□ 0.7
DKC1-213ENST00000620277 HAP1P54257 671 aaPredicted RBP19.45■□□□□ 0.7
DKC1-213ENST00000620277 KCNQ3O43525 872 aa19.44■□□□□ 0.7
DKC1-213ENST00000620277 DLG5Q8TDM6 1919 aa19.44■□□□□ 0.7
DKC1-213ENST00000620277 OFD1O75665 1012 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 USP44Q9H0E7 712 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 TTC12Q9H892 705 aaPredicted RBP19.43■□□□□ 0.7
DKC1-213ENST00000620277 HCLS1P14317 486 aaPredicted RBP19.43■□□□□ 0.7
DKC1-213ENST00000620277 FERMT3Q86UX7 667 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 RASEFQ8IZ41 740 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 ARHGAP31Q2M1Z3 1444 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 FAM173BQ6P4H8 233 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
DKC1-213ENST00000620277 TAF7Q15545 349 aaPredicted RBP19.42■□□□□ 0.7
DKC1-213ENST00000620277 TSPY26PQ9H489 355 aa19.42■□□□□ 0.7
DKC1-213ENST00000620277 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
DKC1-213ENST00000620277 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
DKC1-213ENST00000620277 VPS37CA5D8V6 355 aaPredicted RBP19.41■□□□□ 0.7
DKC1-213ENST00000620277 ATP8B2P98198 1209 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 TAOK2Q9UL54 1235 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 CDK12Q9NYV4 1490 aaPredicted RBP19.41■□□□□ 0.7
DKC1-213ENST00000620277 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 BRD1O95696 1058 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 GNAI3P08754 354 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 CLEC17AQ6ZS10 378 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 CCDC83Q8IWF9 413 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 NECAB1Q8N987 351 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 ATP7BP35670 1465 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
DKC1-213ENST00000620277 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.4■□□□□ 0.7
DKC1-213ENST00000620277 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 SETD1BQ9UPS6 1966 aaKnown RBP19.4■□□□□ 0.7
DKC1-213ENST00000620277 AIMP1Q12904 312 aaKnown RBP19.4■□□□□ 0.7
DKC1-213ENST00000620277 GIMAP6Q6P9H5 292 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 ABTB2Q8N961 1025 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 SPC24Q8NBT2 197 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 KCNJ4P48050 445 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 TSPOAP1O95153 1857 aa19.4■□□□□ 0.7
DKC1-213ENST00000620277 PI4KAP2A4QPH2 592 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 LARGE1O95461 756 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 CASTP20810 708 aaKnown RBP19.39■□□□□ 0.69
DKC1-213ENST00000620277 COL9A3Q14050 684 aaPredicted RBP19.39■□□□□ 0.69
DKC1-213ENST00000620277 PI4KAP1Q8N8J0 262 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 NOL7Q9UMY1 257 aaKnown RBP19.39■□□□□ 0.69
DKC1-213ENST00000620277 AMOTL2Q9Y2J4 779 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 SIL1Q9H173 461 aa19.39■□□□□ 0.69
DKC1-213ENST00000620277 SOS1Q07889 1333 aaPredicted RBP19.39■□□□□ 0.69
DKC1-213ENST00000620277 AK2P54819 239 aa19.38■□□□□ 0.69
DKC1-213ENST00000620277 CHPF2Q9P2E5 772 aa19.38■□□□□ 0.69
DKC1-213ENST00000620277 ZKSCAN5Q9Y2L8 839 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms