RNA–Protein interactions for RNA: ENST00000620262.1

PCDH18-208, Transcript of protocadherin 18, humanhuman

TSL 4

Gene PCDH18, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-208ENST00000620262 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
PCDH18-208ENST00000620262 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
PCDH18-208ENST00000620262 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
PCDH18-208ENST00000620262 NSD3Q9BZ95 1437 aa11.6□□□□□ -0.55
PCDH18-208ENST00000620262 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
PCDH18-208ENST00000620262 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
PCDH18-208ENST00000620262 DDX54Q8TDD1 881 aaKnown RBP11.6□□□□□ -0.55
PCDH18-208ENST00000620262 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
PCDH18-208ENST00000620262 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
PCDH18-208ENST00000620262 HTRA3P83110 453 aa11.59□□□□□ -0.55
PCDH18-208ENST00000620262 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
PCDH18-208ENST00000620262 WWC3Q9ULE0 1092 aa11.59□□□□□ -0.55
PCDH18-208ENST00000620262 ARFGEF1Q9Y6D6 1849 aa11.58□□□□□ -0.56
PCDH18-208ENST00000620262 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
PCDH18-208ENST00000620262 RAB3GAP2Q9H2M9 1393 aa11.58□□□□□ -0.56
PCDH18-208ENST00000620262 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
PCDH18-208ENST00000620262 TNRC6CQ9HCJ0 1690 aaKnown RBP11.58□□□□□ -0.56
PCDH18-208ENST00000620262 PKD1L3Q7Z443 1732 aa11.57□□□□□ -0.56
PCDH18-208ENST00000620262 IP6K1Q92551 441 aa11.57□□□□□ -0.56
PCDH18-208ENST00000620262 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
PCDH18-208ENST00000620262 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
PCDH18-208ENST00000620262 MEGF6O75095 1541 aa11.56□□□□□ -0.56
PCDH18-208ENST00000620262 MAP2P11137 1827 aaKnown RBP11.56□□□□□ -0.56
PCDH18-208ENST00000620262 HSPA1AP0DMV8 641 aaKnown RBP11.56□□□□□ -0.56
PCDH18-208ENST00000620262 HSPA1BP0DMV9 641 aaKnown RBP11.56□□□□□ -0.56
PCDH18-208ENST00000620262 SSFA2P28290 1259 aa11.56□□□□□ -0.56
PCDH18-208ENST00000620262 TGFB2P61812 414 aa11.56□□□□□ -0.56
PCDH18-208ENST00000620262 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
PCDH18-208ENST00000620262 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
PCDH18-208ENST00000620262 CGNL1Q0VF96 1302 aa11.56□□□□□ -0.56
PCDH18-208ENST00000620262 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
PCDH18-208ENST00000620262 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
PCDH18-208ENST00000620262 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
PCDH18-208ENST00000620262 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
PCDH18-208ENST00000620262 C16orf71Q8IYS4 520 aaPredicted RBP11.55□□□□□ -0.56
PCDH18-208ENST00000620262 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
PCDH18-208ENST00000620262 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
PCDH18-208ENST00000620262 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
PCDH18-208ENST00000620262 C7P10643 843 aa11.54□□□□□ -0.56
PCDH18-208ENST00000620262 RGPD2P0DJD1 1756 aa11.54□□□□□ -0.56
PCDH18-208ENST00000620262 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.53□□□□□ -0.56
PCDH18-208ENST00000620262 NME9Q86XW9 330 aa11.53□□□□□ -0.56
PCDH18-208ENST00000620262 SMC1BQ8NDV3 1235 aa11.53□□□□□ -0.56
PCDH18-208ENST00000620262 OTUD5Q96G74 571 aa11.53□□□□□ -0.56
PCDH18-208ENST00000620262 KDM2BQ8NHM5 1336 aa11.53□□□□□ -0.56
PCDH18-208ENST00000620262 SBF1O95248 1867 aa11.53□□□□□ -0.56
PCDH18-208ENST00000620262 EDC4Q6P2E9 1401 aaKnown RBP11.52□□□□□ -0.56
PCDH18-208ENST00000620262 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
PCDH18-208ENST00000620262 ITGB4P16144 1822 aa11.52□□□□□ -0.57
PCDH18-208ENST00000620262 SMARCC1Q92922 1105 aaPredicted RBP11.52□□□□□ -0.57
PCDH18-208ENST00000620262 AK7Q96M32 723 aa11.52□□□□□ -0.57
PCDH18-208ENST00000620262 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
PCDH18-208ENST00000620262 BCS1LQ9Y276 419 aa11.51□□□□□ -0.57
PCDH18-208ENST00000620262 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
PCDH18-208ENST00000620262 TIE1P35590 1138 aa11.5□□□□□ -0.57
PCDH18-208ENST00000620262 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
PCDH18-208ENST00000620262 ARHGAP27Q6ZUM4 889 aa11.5□□□□□ -0.57
PCDH18-208ENST00000620262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCDH18-208ENST00000620262 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
PCDH18-208ENST00000620262 MMP10P09238 476 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 HOXC9P31274 260 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 PRDM10Q9NQV6 1147 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 PCDH11XQ9BZA7 1347 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 PCDH11YQ9BZA8 1340 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 RTL1A6NKG5 1358 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
PCDH18-208ENST00000620262 KDM6AO15550 1401 aaPredicted RBP11.47□□□□□ -0.57
PCDH18-208ENST00000620262 MAP3K19Q56UN5 1328 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 A0A0G2JLW4 131 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 FCHSD2O94868 740 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 KCNA3P22001 575 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 RRAGCQ9HB90 399 aa11.47□□□□□ -0.57
PCDH18-208ENST00000620262 PHF14O94880 888 aa11.46□□□□□ -0.57
PCDH18-208ENST00000620262 DPEP1P16444 411 aa11.46□□□□□ -0.57
PCDH18-208ENST00000620262 NLGN1Q8N2Q7 840 aa11.46□□□□□ -0.57
PCDH18-208ENST00000620262 LINC00116Q8NCU8 138 aa11.46□□□□□ -0.57
PCDH18-208ENST00000620262 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
PCDH18-208ENST00000620262 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.58
PCDH18-208ENST00000620262 LOC102724428A0A0B4J2F2 783 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 SIK1P57059 783 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 MPRIPQ6WCQ1 1025 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 IFNL1Q8IU54 200 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 CCDC87Q9NVE4 849 aa11.45□□□□□ -0.58
PCDH18-208ENST00000620262 CYP27B1O15528 508 aa11.44□□□□□ -0.58
PCDH18-208ENST00000620262 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
PCDH18-208ENST00000620262 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
PCDH18-208ENST00000620262 HDGFL2Q7Z4V5 671 aaPredicted RBP11.44□□□□□ -0.58
PCDH18-208ENST00000620262 RAPGEF4Q8WZA2 1011 aa11.44□□□□□ -0.58
PCDH18-208ENST00000620262 PIGBQ92521 554 aa11.44□□□□□ -0.58
PCDH18-208ENST00000620262 RNF181Q9P0P0 153 aa11.44□□□□□ -0.58
PCDH18-208ENST00000620262 A0A1W2PP64 1363 aa11.43□□□□□ -0.58
PCDH18-208ENST00000620262 GNPATO15228 680 aa11.43□□□□□ -0.58
PCDH18-208ENST00000620262 VEGFAP15692 232 aaPredicted RBP11.43□□□□□ -0.58
PCDH18-208ENST00000620262 TATP17735 454 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms